Gene Pden_2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2398 
Symbol 
ID4579253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2394938 
End bp2396110 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content68% 
IMG OID639769727 
Producthypothetical protein 
Protein accessionYP_916182 
Protein GI119385126 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.90734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.419537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATCG AGCGCCGCAT AACCAACACC CTAAAGTTCC TGCTGGACGA CAGCCCCGCC 
GTTGCCCTGC TGGGGCCGCG CCAGGTGGGC AAGACCACGC TGGCACAGGA GCTGGGAGAC
GAGCGCCCCT CGCTCTATCT CGACCTCGAA TCCAGCGCCG ACGGGGCCAG GCTCTCGGAC
CCCGAACTCT ACCTTTCGGC GCATGAGGAC AAGCTGGTCA TCCTCGATGA GGTCCAGCGG
GTGCCGGACC TGTTCCAGAA CCTGCGCGGC CTGATCGACC GGGGCCGGCG CAAGGGGCTG
CGGGCGGGCC GGTTCCTGCT GCTCGGCTCG GCTTCCATCG ACCTGCTGCG GCAATCCGGC
GAGACGCTGG CGGGGCGGAT CGCCTACGCC GAACTCGCCC CCCTCGACGC GCTGGAGGTT
CCTGCCGCCG ATCTGGACCG GCTCTGGCTG CGCGGCGGCT TTCCCGACAG TTTCCTCGCC
AAGGGCGATC AGGCCAGCCT GCGCTGGCGG CGCGACTTCA TCCGCACCTA TCTGGAGCGC
GACATTCCCG CGCTCGGTCC CCGCATCGCG GCCGAGACCC TGCGCCGCTT CTGGACCATG
CTGGCGCATC GGCAATCCGG CCTGTCGAAC GCCGCCGAGC TTGCCCGCGC GCTCGGGGTC
GATGCCAAGA CCGTCGCCTC CTATCTCGAT CTGCTGGTCG ACCTGATGCT GGTGCGCCGC
CTGGAGCCCT GGCACGCGAA TATCGGCAAG CGGCTGGTCA AGTCCCCGCG CATCTATGTG
CGCGACACCG GCATCCTGCA TGCCCTTCTG GGGCTGACGA CGCTGGATGA CGTTCTTGGC
CACCCCGTTG CGGGGGCGAG CTGGGAGGGG CTGATCATCG AGACCGCCCA TGCGCTGATG
CCAGAAGAGA CGCAGGCGCA GTTCTACCGC AGCGGTGCGG GGGCCGAGGT CGATCTGGTG
CTGACGCTAC CGGGCGGCGC GGTCTGGGCC GTCGAGGTCA AGCGCAACCT TGCGCCCAAG
GTCGAGCGCG GCTTTCACTC GGCCTGCGAA GACCTGCAAC CTGCGCGGCG GATCGTGGTC
TATCCGGGGG ATGAGGCTTT CCCGCTGCCG AACGGGATCG AGGTGATGTC GCTGCACCAG
TTCGGGCAGG ATCTGCTGGC GCTTCATTCG TAG
 
Protein sequence
MLIERRITNT LKFLLDDSPA VALLGPRQVG KTTLAQELGD ERPSLYLDLE SSADGARLSD 
PELYLSAHED KLVILDEVQR VPDLFQNLRG LIDRGRRKGL RAGRFLLLGS ASIDLLRQSG
ETLAGRIAYA ELAPLDALEV PAADLDRLWL RGGFPDSFLA KGDQASLRWR RDFIRTYLER
DIPALGPRIA AETLRRFWTM LAHRQSGLSN AAELARALGV DAKTVASYLD LLVDLMLVRR
LEPWHANIGK RLVKSPRIYV RDTGILHALL GLTTLDDVLG HPVAGASWEG LIIETAHALM
PEETQAQFYR SGAGAEVDLV LTLPGGAVWA VEVKRNLAPK VERGFHSACE DLQPARRIVV
YPGDEAFPLP NGIEVMSLHQ FGQDLLALHS