Gene Pden_2392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2392 
Symbol 
ID4579247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2388052 
End bp2389314 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content68% 
IMG OID639769721 
Productcyclopropane-fatty-acyl-phospholipid synthase 
Protein accessionYP_916176 
Protein GI119385120 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.497036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCTC TGGAAGCTCT GATCGAACGG AAACTGCAAC GACTGGGCGT GCCGCTGGCC 
GTGCGCCTGC CCTCGGGGCG GCGGCTGGGA CCGGCGGATG CACGCGTCAC CATCGCCTTC
AAGGACATGG CCGCGCTGGC GCCGCTGGCC TCGGCGCGGC TGGGCCGGCT GGGGGACGAG
ATCGTCCGCG GCCGCGCCCG GATCGAGGGC TCGATGCGCG ACCTGATGCG AATCGTCGCG
GCGCTGGTGC CCGACGAGGG CCAGCCGATC CAGCCCAAGC CCTGGCAACG GCTGTTCAAT
CACCTGCATT CGGTGCTGCG CCACAGCCGC GACCGCGACG CGCGGCAGAT CCGCGCGCAT
TACGACGTCT CGGACGATTT CTATGCGCTC TGGCTGGACC CGCGACGGGT CTATTCCTGC
GCCTATTTCG CCCAGCCGCA GATGACGCTG GCGCAGGCGC AAGAGGCCAA GCTGGACCTG
ATCTGCCGCA AGCTGGACCT GCATCCGGGC GAACGCTTCG TCGATATCGG CGCCGGCTGG
GGTGCGCTTT TGCTGCATGC CGCGCGCCAT TACGGCGTCG ATGCCACCGG CATCACCCTG
TCGCAGAACC AGTTCGACCA TGTCAGCCGC ATCATCGCCG AAGAGGGCCT GGGCGAAAGG
GTGCGCATCC TGCTGTGCGA CTATCGCGAC CTGGTGCCCG ACAGGCCCTT CGACAAGCTC
GCCTCGGTCG GCATGTTCGA ACATGTCGGG CGTGCCAGGA TGGGCACCTA TTGCGACACC
CTGCGCCGGC TGCTGCGGCC GGGCGGGCTG GCGCTGAACC ACGGCATCGC CGCCTCGGGG
GTGGACGATG CGATGGTCGG CGGCGGCCTA GGCGATTTCA TCGAGAAATA CATCTTTCCG
GGCGGCGAGC TGATCCATGT CAGCCAGGCC ATCCGCAGCA TGTCGCAGGC CGGGCTGGAA
ATGGTCGATA CCGAGAACCT GCGGCCGCAT TACGCACGCA CGCTCTGGGC CTGGTCCGAC
GCGCTGGAGG CGCAACTGCC CGAGGCCGAG CAGGAGCTGG CACGCTCGAT GCCGCCCGAG
CGCGCCGCCG AGGTGTTGCA GGCCTACCGG CTGTATCTGG CCGGCTGCGC GCTGGCCTTC
GAGCAGGGCT GGGTGGCGCT TTACCAGATC CTGCTGATCC ATCCCGACCC GGCCATGGCG
ACGCCGGACC TGCCGGGCGC GCAATCCGCC TATCCCTTCC GGCGGGACCA TATCTATCGC
TGA
 
Protein sequence
MPALEALIER KLQRLGVPLA VRLPSGRRLG PADARVTIAF KDMAALAPLA SARLGRLGDE 
IVRGRARIEG SMRDLMRIVA ALVPDEGQPI QPKPWQRLFN HLHSVLRHSR DRDARQIRAH
YDVSDDFYAL WLDPRRVYSC AYFAQPQMTL AQAQEAKLDL ICRKLDLHPG ERFVDIGAGW
GALLLHAARH YGVDATGITL SQNQFDHVSR IIAEEGLGER VRILLCDYRD LVPDRPFDKL
ASVGMFEHVG RARMGTYCDT LRRLLRPGGL ALNHGIAASG VDDAMVGGGL GDFIEKYIFP
GGELIHVSQA IRSMSQAGLE MVDTENLRPH YARTLWAWSD ALEAQLPEAE QELARSMPPE
RAAEVLQAYR LYLAGCALAF EQGWVALYQI LLIHPDPAMA TPDLPGAQSA YPFRRDHIYR