Gene Pden_2386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2386 
SymbolentE 
ID4579242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2382798 
End bp2384420 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content69% 
IMG OID639769715 
Productenterobactin synthase subunit E 
Protein accessionYP_916171 
Protein GI119385115 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1021] Peptide arylation enzymes 
TIGRFAM ID[TIGR02275] 2,3-dihydroxybenzoate-AMP ligase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.444904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAT TCAGCCCTTG GCCGCAAGAC CTCGCGCAGC GCTATCGCGA GGCCGGTTAT 
TGGATCGACC AGCCGCTGAC CCATATCCTG GACGCGCAGC TGGCCGCCAA CCCCGAGGCC
GAGGCGCTGG TCTGCGGTTC GCGCCGCTTC AGCTATGCCG ATCTGGACCG GCTGTCGTGC
AACCTGGCCG CCAGGCTGGC GCAGCAGGGG CTGGGCCATG GCGATACGGC GCTGGTGCAA
TTGCCGAACG TGGCCGAGTT CTTCGTCGCC TTCTTCGCGC TTCTGCGGAT CGGCGTGGCG
CCGGTGAACG CGTTGTTCAG CCATCGCCGG CTGGAGCTTG CGGAATATGT CCGCCAGATC
GCGCCGCGCG TGGTCATTGC CTCGCGCCAG CACGAGCTGT TCCGCGACGA CGCCTTTGCC
GAGGAATTGC GGGCGGGTGG CGTCGCGCAT CTGCTGCTGC TGGGCGAGGA CGACCCCCAG
CGCAGCCTGG ATCACTGGCT GACCCATGGC GGTGACCTGC CGGCGGGGGC GGGGCCGACC
CCGGGCGGCG AGGTCGCCTT CTTCCAGTTG TCGGGCGGCA GCACCGGGAC GCCCAAGCTG
ATCCCGCGCA CCCATAACGA TTACGACTAC AGCATCCGCG CCAGCGTCCA GATCTGCGGC
GTGACCTCGG CCACCCGCTT TCTTTGCGCC TTGCCGGCGG GGCACAACTT CACCATGAGC
TCGCCCGGCG CGCTGGGGGT GTTCCATGCC GGCGGCACGG TGGTCATGGC CTCCAGCCCC
GAACCGCTGA CCTGCTTCCA GATCGTGGCG CGCGAACGGA TCACCATGGC GCCGCTGGTG
CCGCCCGCCG TCGCGCTGTG GCTGCGCGCG GTCGAGGAAG AGCCCGCCCG CCGCGCCATG
CTGGACAGCC TGGAGCTGAT GCTGGTCGGC GGCGCCAGTT TCGCCGAGGC GACGGCGCGG
CGCGTTCCCG AACTGCTGGG CTGCCGCCTG CAGCAGGTCT TCGGCATGGC CGAGGGGCTG
GTGAACTATA CCCGGCTGGA CGATCCGCCC GAGGTGATTT TCACCACCCA GGGCCGGCCG
ATCAGCCCCG ACGACGAGGT GCGCATCGTC GACGAGGACG GCTGCGACGT GCCGGACGGC
ACGCCCGGCG CGCTGGCAAC CCGCGGCCCC TATACCTTCC GCGGCTACTA CCGCAGCCCC
GAGCACAATG CGAAGTCCTT TGACGCCGAG GGGTTCTACT ATTCGGGGGA CGTGGTGGTG
CGGCAGGGCG GCAACCTGCG CGTCGTCGGC CGCATCAAGG ACCAAATCAA CCGGGGCGGC
GAAAAGATCG CCGCCGAGGA AATCGAGAAC CTGCTGGTGC GCCACCCCGA CATCACCCAT
GCCGCGCTGG TCGCCGCCCC CGACGCGCAT CTGGGCGAGA AAAGCTGCGC CTTCCTGGTG
CTGCGCGAGG GGTCGGGCAA GCTTTCCTCG CCGGCGCTGC GCCGGCACCT GCTGGAACTG
GGCGTGGCCG AATACAAGCT GCCCGACCGT TTCCGCTTCG TGCCCGAACT GCCGCTGACG
GCGGTGGGCA AGATCGACAA GCGCCGCCTG CGCGACAGCC TCGTGGCCGA AACCGCCGCC
TGA
 
Protein sequence
MIEFSPWPQD LAQRYREAGY WIDQPLTHIL DAQLAANPEA EALVCGSRRF SYADLDRLSC 
NLAARLAQQG LGHGDTALVQ LPNVAEFFVA FFALLRIGVA PVNALFSHRR LELAEYVRQI
APRVVIASRQ HELFRDDAFA EELRAGGVAH LLLLGEDDPQ RSLDHWLTHG GDLPAGAGPT
PGGEVAFFQL SGGSTGTPKL IPRTHNDYDY SIRASVQICG VTSATRFLCA LPAGHNFTMS
SPGALGVFHA GGTVVMASSP EPLTCFQIVA RERITMAPLV PPAVALWLRA VEEEPARRAM
LDSLELMLVG GASFAEATAR RVPELLGCRL QQVFGMAEGL VNYTRLDDPP EVIFTTQGRP
ISPDDEVRIV DEDGCDVPDG TPGALATRGP YTFRGYYRSP EHNAKSFDAE GFYYSGDVVV
RQGGNLRVVG RIKDQINRGG EKIAAEEIEN LLVRHPDITH AALVAAPDAH LGEKSCAFLV
LREGSGKLSS PALRRHLLEL GVAEYKLPDR FRFVPELPLT AVGKIDKRRL RDSLVAETAA