Gene Pden_2364 details

Gene Information

• Locus tag: Pden_2364
• ID: 4579221
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Paracoccus denitrificans PD1222
• Kingdom: Bacteria
• Replicon accession: NC_008686
• Strand: +
• Start bp: 2359584
• End bp: 2365085
• Gene Length: 5502 bp
• Protein Length: 1833 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 639769694
• Product: alpha-2-macroglobulin domain-containing protein
• Protein accession: YP_916150
• Protein GI: 119385094
• COG category: [R] General function prediction only
• COG ID: [COG2373] Large extracellular alpha-helical protein

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.211363
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCACATC CCGTCTGGCA CGGTTTCATC GCGGCGGCCC TGGGCGGGCT TCTCGTCACC 
GGCGCGGCTC TGGCACAGGA TGCACCGCTG CCCGAACGGC GGCTGTCCCT GCAGGCCGAT 
ACCGACCTGC CGGGCGGCGA CCTGGGGCCG ATCTTCGACA CCACGCTGCA AGCCTGCGTG 
CAGGCATGCC TGGGCAATGA CGACTGCCGC GCGCTGACCT ACAACCAGCG GTCCCGCGCC 
TGCTTCCCCA AGGGTGAGGG CACGGGCTCC GCGACCGCCT TTGCCGGCGC GCTGTCGGGC 
CATGTCGTGG CGACCACGGC CGAGGAACGG CTGCGCGCCG AATCCCGTGC CAAGGCCGCC 
CCCTTCGTCG CGCCGCAGGA TCTGGCCGCC GCGCAATCGC TGGCCCGATC CTTTCCGGCC 
CTGCACCCGC CGCTGGGCGC GGACTATCCG CAGGGCAGCG CGCAGGCTGC CGAAGCCTCG 
GGCGAACTGG CGCTGGCGGC GCGGATCACC GCCGCCGAGG TCGCACGCTA TGACCGGCCC 
GCCGACTGGA CCAATCTCGC CCGGCTGACG CTCTATACCA GCAACCAGGG CGACGGCGAG 
GCATCGAACG CCATCGCTTC GATGGCGATC AACGGCTATC TGCGGGCGGG CGAGGATGCG 
GTGGCGGCCC GGGCGCTGTC CTGGCTCGCC ATGGCGTGGG AGCGGCTGGA CCGCGGTCGC 
GACGCGCTGT CGGCGCTGCG GCTGGCGGCG CGGCTTTCGC CCGGCGACGA CGCCATCGCC 
CAGGCGCTCG AGGAATCGCA GGCCCGCAAC GGGCTGCGCG TCACCGACAC CCAGGTCGAA 
GCCGAGGGCA AGATGCCGCG CTTCTGCGCG GTGATGTCGC GCGAACTCTC CTCCGGCACC 
GATTATGCGC AATTCCTGCG CCTGCCCGGC CGCGACCTGA CCGTCGAGGC CGATGGCGAA 
CGGCTTTGCG TCGCCGGCCT GACCCATGGC CAGGATGTCG AGCTGACCCT GCGCGCCGGC 
CTGCCCGCCG CCGATGGCGA GACGCTGGCC CGCGACGTGA CGCTGAAAGG CTATGTCCGC 
GACCGCGCGC CCTCGGTCCG CTTTCCCGGC CGCGCCTATG TGCTGCCGGC CTCGGGCGAC 
CAGCGGCTGT CCATGGTGAC GGTCAATGCC GACACGATCG ACCTGCGCCT GCTGCGCATT 
TCCGACCGCA ACCTGATCCG CGCCATGGCC GAGGACATGT TCGCGACGCC GCTGGACAGC 
TGGCGCGCCG ATTATTTCAG CGATCGCATG GCGCGCGAGG TCTGGAAGGG CTCGGCGCAG 
GTGGCCAGGC CGATGGGGCA GGAAACCCTG AACCAGGAAC TGACCACCAG CCTCGCCATT 
CCCGCCGAGG CCGGCCCGCT GGAACCCGGC ATCTATATCG TCGAGGCCGG CATCGAGAAC 
CAGAACGTCT CGGATACCGG GCTTGCCACG CAATGGTTCG TGATCTCGGA TTTCGGGATC 
TCCACCTTCT CGGGCGCCGA CGGGCTGACC GTCGCCGTGC GCAGCCTTGC CGACACCTCG 
GCCAAGGCGG GGGCCGAGGT CGCTTTGATC AGCCGCTCGA ACGAGGTGCT GGCCAAGGCC 
GCGACCGATG CGGACGGCAT CGCGCATTTC GCGCCGGGCC TCGCCATGGG CAAGGAAGGC 
GCCGCGCCGG CGCTGGTCAC GGCGACCGAA TGGCAGGGCG AGGGCGCCGA GCGTGCGCCC 
CGCGACATGG CCTTCCTGTC GCTCTCGGAC CCCGAATTCG ACCTTTCCGA CCGCGGCGTC 
GAGGGCCAGC CCCCCGCACC GCCCATCGAC CTGTTCGTGA CCACCGACCG CGGCGCCTAC 
CGCGTCGGCG AGACGGTGAA CGCGACGGTG CTGGCCCGCA ATGCCGAGGC CCGGGCGCTG 
GAAAACCTGC CGCTGACCGC GGTGATCCTG CGTCCCGACG GGGTCGAGGC GACGCGCCTG 
CCCGCGCAGG ATGCCGGCGC CGGCGGCAGC GTGGTCAACT GGCAGATCCC CGGCAACGCC 
CCGCGCGGCA CCTGGCGGAT GGAGCTGCGC ACCGAGGCGG ACGGCCCGGC GCTGGCCACC 
GCGCGCATGC TGGTCGAGGA TTTCCTGCCC GAGCGCATCG ACTTCACCCC GCGCCTGCCC 
GAAGGCCCGG CGCGCGCCGG CGGCACGCTG GAGCTGTCGC TTTCGGCGCA TTGGCTGTTC 
GGCGCGCCGG CCGCGAACCT GCCGGTCGAG GGGTTGTTGC GCCTGTCGCC CACCCGCAGC 
CTGGACGGTT TCGACGGCTA TGCCTTCGGC CGGCACGACG ACGACAGCGC GCCAGTAACC 
GACAGCCTGC CTGCGGGGGT GACCGACGCA CAGGGCAATT ACCAGGCGCG GATCGAACTG 
CCGCCCGCCG GCGAACTCGG CCCCCGCCCG GTCGAGGCCG AGGTGGTGCT GGACATCCGC 
GAAGGCGCCG GCCGTCCGGT CGAGCGCAGC GAATCCCGCG TGGTCATGCC CGAGGCCCCG 
ACCGTCGGCA TCAGGCCGCT GTTCGAGGGC GATACGGTTT CGGAAAACGC CGAGGCGCGC 
TTTGCGCTCA TCGCCGTCGG CCCGGACCTG AAACCGGCGG CCGAGCCGCT GCGCTGGGTT 
CTGAACCGCG TCGACACCGA CTACCAATGG TATTCGCTGG GCGGGCAGTG GAACTGGGAG 
GTGATCACCT CGCGCACCCG CATCGCCGAA GGCGTGGCCG AGCCGGGCGA GGTCGCGGCC 
GAGGTCGCGG TCCAGGTCCA ATGGGGCCAG TATGAGCTGG TGGCCGAGCC GGCCTCGGGC 
CAGGGCGGGC CAAGCTCGGT GCAGTTCTAC TCGGGCTGGG GCGCGGTGGC GAATTCCGGG 
ACCCAGACGC CCGACCGCCT GAAGGTGGCG CTGGACCGGC CCGCCTATCG CAGCGGCGAG 
ACCGCGCGCG TCCAGGTCGA GGCGACCAGC GACGGGCTGG GCCTTGTCTC GGTGCTGTCG 
AACCGGCTGG TCTCGATGCA GACCGTGGCA CTGAAGGCGG GCGAGATCCG GATCGACCTG 
CCGGTGACCG ACGACTGGGG CGCCGGCGTC TATGTCACCG TCAGCGCCAT CCGCCCGCTG 
GGCGAGGCGC AGCCCGGCGA CCGCCAGCCG GTGCGCGCGC TGGGTCTGGC CCATGCCGCC 
GTCGATCCCG GCGACCGCAG GCTTGCCGCC AGCATCGAGG CGCCGGCCGA GACCCGCCCG 
CGCGGCACGA TCCCGGTGAC GCTGAAGGTC GAGGGCGCGG CGGGCGAAAC GGTGCATGCC 
ACCATCGCCG CCGTCGACCA GGGCATCCTG AACCTGACCC GGTTCCAGCC GCCCAACCCC 
TCGCAGCATT ATTTCGGCCA GCGCCGGCTG GGCGTCGCCC TGCGCGATCT TTACGGGCGG 
CTGATCCTGC CGACCGGCGC CCCCGACGGC GCGTTGCGCG AGGGGGGCGA TGCCAGCCTT 
GCCGGCAATG CCGAGGCGCC GCCGCCGACC GAAAAGCTGA TGAGCTGGTT CTCGGGGCCC 
CTGACCGTGG GCGCGGACGG CACCGCGACC ATCGAGGTGC CGGTGGGCGA TTTCAACGGC 
GAGGTGCGGG TCATGGCCGT CGTCTGGTCC GAAAAGGGGC TGGGCCAGGC CGATGCCTCG 
GTCCTGGTGC GCGATCCGGT GGTGATGACC GTGACCGCGC CAGCCTTCCT CGCGCCCGGC 
GACCGGGCGC AGGTCGGGCT GCGACTGACC CATGCCTCGG GTCCGGCCGG CGAGATGCGG 
CTCTCGGTCC AGCAGGTGGG CGGCGAGGCA CCGCTGACCA CCAGCCTGCC GGCCGACACC 
GTGACCCTGG CCGAAAAGGC CGAGGCGCAG GTGCAGATGC CCGTCGCGGC GGGCGATGCC 
GAGGGGCTGG CCAATCTGCG GCTGACCCTG ACCACGCCGG ACGGGCAGGC GCTGACCAAG 
GACATCGCCA TTCCCGTCGC GCTGAACGAG GCCGACATCC AGCGCCGCGA CCGGCTGGTG 
GTCGAACCGG GGCAAAGCCT GACCGTGCCC GCCGGCCTGA CCGAAACCAT GCTGCCCGGG 
GCCGAGATCA CCGTCGCCAT CGGCCCCTAT GCCCGGCTGG ACGTGGCGGG CGCGCTGATG 
CGGCTGGCAC GCTATCCCTA TGGCTGCACC GAGCAGTTGA CCTCGGGCGC CATGCCGCTG 
ATCTACATGC CCGGCCTTGC CGCCGTCGAA GGGGTGGCCA GCGAAAACAC GGCCGAGCAG 
GTCCAGAAGG CCATCACCGA GATCCTGACC CGCCAGGGCT CGAATGGCGG ATTCGGGCTG 
TGGTATGCCG ATTCGGGCGA TCTGTGGCTG GAAGCCTATG TCACCGACTT CCTGTCGCGG 
GCGCGGGCGG CAGGCTATCG CGTGCCGGAC ACCGCCTTCC GCATGGCCAT CGACAACCTC 
AGGAACCGCG CCAATTACGC GACCGAACCC GGCGCCGCCT CGGCCGAGGA AAATGCGGCG 
CTGGCCTATG CGCTGGCGGT GCTGGCACGA GAGCGGGCGG CGACGGTGGG CGACCTGCGC 
TATTACGCCG ATACCGCCGC GGGATCGTTC TCGACCCCGA TGGGCGCGGC CCATCTGGGC 
GCGGCGCTGG CCTCCTATGG CGACCAGAGC CGGGCGGATC GCATGTTCAC GCAGGCGCGG 
AACCTGCTGA ACCTCGACGC GCCCGAGCCG CATGCCTTCC GCGCCGATTA CGGCACCAAG 
CTGCGCAACG CCACCGCGCT GCTGGCACTG GCGGCCGAGG CGAAGACGCA GGCCGTCGAC 
ACCACCGACC TGACCAGCCG GATCGCCGAG CGCATCGCGC GGGCCGAAGA GGACGGCCGC 
AGCCTGTCCA CCCAGGAATC GGTCTGGACG GTGCTGGCGG CACAATCGCT GTTCACCTCG 
ACCCCGCCCG CGACGCTGAA CGGCGTGGCG CTGAGCCAGC CGGTGGCCAG CCTGCCGGCG 
GATGCGAGCC TTGCCAATAC CGGCACGCAG GCGCTGGAGG TGACGCTGAC CGCGACCGGC 
AAGCCCGCGG GTCCGGTCGC GTCCGGCGGC AAGGGCTATA CCATCGCACG GCGCTATTAC 
AGCATGGAGG GCGAGGCGCT GGACCCCGCC AGCCTGCAAC AGGGCACGCG CATGGTGGTC 
GAGCTGGAGA TCGCGCCGCA ATCCGAGGGC GGCGGGCGGC TGGTCATCGC CGATCCCCTG 
CCCGCCGGGT GGGAGATCGA CAACCCGAAC CTGCTGCGCG CCGGCGACGT CTCTGCGCTG 
GACTGGCTGG AGGCCGAGAC CTCGGCCGAG ATGACCGAGT TCCGCGCCGA CCGTTTTGCG 
GCGGCGCTGA CCTGGACCTC GGCCGAGCGG TTCCGGCTGG CCTATATCGT GCGCGCCGTG 
ACGCCGGGCG AGTTCCGCCA TCCTGCCGCC AGCGTCGAGG ACATGTATCG CCCCGAGTTC 
CGCGCCTGGT CGGACAGCGG CACCGTCGCC GTCACGCCCT GA 

 

Protein sequence

MAHPVWHGFI AAALGGLLVT GAALAQDAPL PERRLSLQAD TDLPGGDLGP IFDTTLQACV 
QACLGNDDCR ALTYNQRSRA CFPKGEGTGS ATAFAGALSG HVVATTAEER LRAESRAKAA 
PFVAPQDLAA AQSLARSFPA LHPPLGADYP QGSAQAAEAS GELALAARIT AAEVARYDRP 
ADWTNLARLT LYTSNQGDGE ASNAIASMAI NGYLRAGEDA VAARALSWLA MAWERLDRGR 
DALSALRLAA RLSPGDDAIA QALEESQARN GLRVTDTQVE AEGKMPRFCA VMSRELSSGT 
DYAQFLRLPG RDLTVEADGE RLCVAGLTHG QDVELTLRAG LPAADGETLA RDVTLKGYVR 
DRAPSVRFPG RAYVLPASGD QRLSMVTVNA DTIDLRLLRI SDRNLIRAMA EDMFATPLDS 
WRADYFSDRM AREVWKGSAQ VARPMGQETL NQELTTSLAI PAEAGPLEPG IYIVEAGIEN 
QNVSDTGLAT QWFVISDFGI STFSGADGLT VAVRSLADTS AKAGAEVALI SRSNEVLAKA 
ATDADGIAHF APGLAMGKEG AAPALVTATE WQGEGAERAP RDMAFLSLSD PEFDLSDRGV 
EGQPPAPPID LFVTTDRGAY RVGETVNATV LARNAEARAL ENLPLTAVIL RPDGVEATRL 
PAQDAGAGGS VVNWQIPGNA PRGTWRMELR TEADGPALAT ARMLVEDFLP ERIDFTPRLP 
EGPARAGGTL ELSLSAHWLF GAPAANLPVE GLLRLSPTRS LDGFDGYAFG RHDDDSAPVT 
DSLPAGVTDA QGNYQARIEL PPAGELGPRP VEAEVVLDIR EGAGRPVERS ESRVVMPEAP 
TVGIRPLFEG DTVSENAEAR FALIAVGPDL KPAAEPLRWV LNRVDTDYQW YSLGGQWNWE 
VITSRTRIAE GVAEPGEVAA EVAVQVQWGQ YELVAEPASG QGGPSSVQFY SGWGAVANSG 
TQTPDRLKVA LDRPAYRSGE TARVQVEATS DGLGLVSVLS NRLVSMQTVA LKAGEIRIDL 
PVTDDWGAGV YVTVSAIRPL GEAQPGDRQP VRALGLAHAA VDPGDRRLAA SIEAPAETRP 
RGTIPVTLKV EGAAGETVHA TIAAVDQGIL NLTRFQPPNP SQHYFGQRRL GVALRDLYGR 
LILPTGAPDG ALREGGDASL AGNAEAPPPT EKLMSWFSGP LTVGADGTAT IEVPVGDFNG 
EVRVMAVVWS EKGLGQADAS VLVRDPVVMT VTAPAFLAPG DRAQVGLRLT HASGPAGEMR 
LSVQQVGGEA PLTTSLPADT VTLAEKAEAQ VQMPVAAGDA EGLANLRLTL TTPDGQALTK 
DIAIPVALNE ADIQRRDRLV VEPGQSLTVP AGLTETMLPG AEITVAIGPY ARLDVAGALM 
RLARYPYGCT EQLTSGAMPL IYMPGLAAVE GVASENTAEQ VQKAITEILT RQGSNGGFGL 
WYADSGDLWL EAYVTDFLSR ARAAGYRVPD TAFRMAIDNL RNRANYATEP GAASAEENAA 
LAYALAVLAR ERAATVGDLR YYADTAAGSF STPMGAAHLG AALASYGDQS RADRMFTQAR 
NLLNLDAPEP HAFRADYGTK LRNATALLAL AAEAKTQAVD TTDLTSRIAE RIARAEEDGR 
SLSTQESVWT VLAAQSLFTS TPPATLNGVA LSQPVASLPA DASLANTGTQ ALEVTLTATG 
KPAGPVASGG KGYTIARRYY SMEGEALDPA SLQQGTRMVV ELEIAPQSEG GGRLVIADPL 
PAGWEIDNPN LLRAGDVSAL DWLEAETSAE MTEFRADRFA AALTWTSAER FRLAYIVRAV 
TPGEFRHPAA SVEDMYRPEF RAWSDSGTVA VTP