| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2362 |
|---|
| Symbol | |
|---|
| ID | 4579219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 2357282 |
|---|
| End bp | 2358172 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639769692 |
|---|
| Product | pyrroloquinoline quinone biosynthesis protein PqqB |
|---|
| Protein accession | YP_916148 |
|---|
| Protein GI | 119385092 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
|---|
| TIGRFAM ID | [TIGR02108] coenzyme PQQ biosynthesis protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATCG TGATTCTCGG CAGCGGCGCC GGCGGTGGCG TGCCGCAGTG GAACTGTGGT
TGCCGCAACT GCGAGGCCGC GCGCGCAGGA CGCATTCCCG CCATGAGCCA AAGCGGGATT
GCCGTCTCTG CGAATGGCCG GGACTGGGCG CTGGTCAACG CCTCGCCCGA CCTGCGCCAG
CAGCTGGCCG CGACGCCGGC GCTGCGGCCC GGGGGGCTGC GCGGCTCTCC GATCCGCTCG
GTGCTGGTGA CCAACGGCGA TATCGACCAT GTCGCGGGCC TGCTGACCCT GCGCGAGGGG
CAGGGGTTCG ACCTGTTCGC GACCCCCGCC ATCCATGCCG TGCTGGCCGC CAATCCGATG
CTTGCCGCGC TGGACCCCCG GTTGGTCGCC CGGCGCGAGC TGGCGCTGGA GGAAAGCTTC
GAGCTGGCGC CCGGCCTTGT CGCGCGGCTT TTCGCCGTGC CGGGCAAGGT GCCGCTCTAC
ATGGAGGGCG AGCAGGTCGA GACCGACCTG ATGGGCGAGC AGACCGTGGG CGTCGAACTG
GCTGCCGAGG GGCGGCGGGT CTTCTATATC CCCGGCTGCG CCTCGGTTCC CGACTGGCTG
TGCGAACGGA TCTCGGGCGC GGATGCGCTG CTGTTCGACG GCACGCTGTG GACGGATGAC
GAAATGGTCC GCGCCGGCCT TGGAGCCAAG ACCGGGCGGC GCATGGGGCA TGTGCCGGTA
TCAGGCCCCG ACGGCAGCCT GGAGGGGCTG CGCGACCTGG CGCTTGGTGC CCGCATCTAT
GTGCATCTGA ACAATTCGAA CCCGCTGGTC GATCCGGCCA GCCCCGAGCG TGCGATGGCG
CAGGCGGCGG GCTGGCAGAT CGGCCATGAC GGTATGGAGA TCGCGCCATG A
|
|---|
| Protein sequence | MRIVILGSGA GGGVPQWNCG CRNCEAARAG RIPAMSQSGI AVSANGRDWA LVNASPDLRQ
QLAATPALRP GGLRGSPIRS VLVTNGDIDH VAGLLTLREG QGFDLFATPA IHAVLAANPM
LAALDPRLVA RRELALEESF ELAPGLVARL FAVPGKVPLY MEGEQVETDL MGEQTVGVEL
AAEGRRVFYI PGCASVPDWL CERISGADAL LFDGTLWTDD EMVRAGLGAK TGRRMGHVPV
SGPDGSLEGL RDLALGARIY VHLNNSNPLV DPASPERAMA QAAGWQIGHD GMEIAP
|
|---|
| |