| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2346 |
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| Symbol | |
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| ID | 4579398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2341915 |
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| End bp | 2344743 |
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| Gene Length | 2829 bp |
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| Protein Length | 942 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639769676 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_916132 |
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| Protein GI | 119385076 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.301239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAAAT GGACCCCGAC CGACTATAAC CCCGACGATT TCGCCAATCG CCGTCACATC
GGGCCTTCCC CGGCCGAGAT GGCGGCAATG CTGAAGGTCG TGGGCGCCGA AACGCTGGAG
GACCTGATCG GCCAGACCGT GCCGGCAAGC ATCCGGCAGT CCGAATCCCT GGACTGGCCG
GCGCTGTCCG AGGCGGCGCT TTTGCAGCGC ATGCGCGAGG TGGCGGCGAA GAACCAGGTG
ATGACCAGCC TGATCGGGCA GGGCTATTAC GGCACCGTGA CGCCGCCGGC GATCCAGCGC
AACATCCTGG AAAACCCGGC CTGGTACACC GCCTATACCC CCTATCAGCC CGAGATCGCC
CAGGGCCGGC TGGAGGCGCT GCTGAACTTC CAGACCATGG TCGCCGACCT GACCGGGCTG
CCGGTGGCCA ATGCCAGCCT GCTGGACGAG GCGACCGCCG CAGCCGAGGC GATGGCCATG
GCGCAACGCG TGGCGAAGTC CAAAGCCCGC GCGTTCTTCG TCAGCGAGAA CCTGCATCCC
CAGACCATCG CCGTGATCGA GACCCGCGCC GAGCCCCTGG GCATCGAGAT CGTCCGCGGC
TTGGAATGCG ACCCCTCGCA GGTCTTCGGT GCGATCTTCC AGTATCCGGG CACTTTCGGC
GAGGTTCGGG ATTATGCAGC CGAGATCGCG GCTCTGCACG CGGCGGGCGC CGTGGCGATC
ATGGCGACCG ACCTGCTGGC GCTTTGCGTG CTGAAGGAGC CGGGTGCGAT GGGCGCCGAC
ATCGCCATCG GCTCGGCGCA GCGCTTCGGC GTGCCCATGG GCTATGGCGG GCCGCATGCC
GGCTTCATGG CCTGCCGCGA CGAGATGAAG CGCGCCATGC CGGGCCGCAT CGTCGGCGTT
TCGGTCGATG CCAAGGGCAA CCGGGCCTAT CGGCTGTCGC TGCAGACGCG CGAACAGCAT
ATCCGGCGCG AGAAGGCGAC CTCGAACGTC TGCACCGCGC AGGCGCTTCT GGCGGTGATG
GCCGGCTTTT ACGCCGTGTT CCACGGGCCG GTGGGCCTGC GTGCCATCGC CCAGCGGGTG
CATCTGAACG CGGCGACGCT GGCCGATGCG CTGCGTGCCG CCGGGGCCGA GGTCCAGTCC
GATGCCTTTT TCGACACCAT CACGGTACGG GTCGGCGTGG GGCAGGCGGG GATTCTGGCC
GCCGCGCGCC ATCGCGGCAT CAACCTGCGC AAGGTCGGGC GCGACCGGGT CGGCATTTCG
GTCGACGAGA CTACCGATGC GGACGTGATC GCGCGGGTGC TGGATGCCTT CGGCATCACC
GATCCGGCCG AGCCGGCCAA GGCGCCGGCC ATCCCCGAGG CGCTGATCCG CGAAAGCGAT
TACCTGACGC ACCCGGTCTT TCACATGAAC CGGGCGGAAT CCGAGATGAT GCGCTATATG
CGCCGCCTCT CGGACCGCGA CCTGGCGCTG GACCGGGCGA TGATCCCGCT GGGTTCCTGC
ACGATGAAGC TGAACGCGGC GGCCGAGATG ATGCCGATCA CCTGGCCCGA GTTCGGCGCG
CTGCATCCCT TTGCGCCCGA GGACCAGGCC GCCGGCTATC ACGAGGTCTT TGCCGACCTG
ACCGAAAAGC TGTGCGCGAT CACCGGCTAC GACGCGTTCT CGCTGCAGCC GAACAGCGGC
GCGCAGGGGG AATATGCGGG GCTTCTGACC ATCGCCGCCT ATCACAAGTC GCGCGGCGAG
GACCGCGACA TCTGCCTGAT CCCCGTCAGC GCGCATGGCA CCAACCCGGC CAGCGCGCAG
ATGGCGGGCA TGAAGGTCGT GGTGGTGAAA TCGGCCCCGA ACGGCGATAT CGACCTGGAG
GATTTCGCCG ACAAGGCCGC GAAGGCCGGC GACAGGCTGG CGGCGGTGAT GATCACCTAT
CCCTCGACCC ATGGCGTCTT CGAGGACACC GTGCGCGAGG TCTGCCGCAT CGCCCACGAT
CACGGCGGCC AGGTCTATAT CGACGGCGCC AACATGAACG CGCTGGTCGG GCTGGTGCGG
CCGGGCGAGA TCGGCGGCGA TGTCAGCCAC CTGAACCTGC ACAAGACCTT TGCCATCCCG
CATGGCGGCG GCGGTCCCGG CATGGGACCG ATCGGGGTCA AGGCGCACCT GGCGCCCTTC
CTGCCCGCCG ACCCGCGCGA GGGCTCGGGC GCGGTTTCGG CGGCGCCCTG GGGCTCGGCC
TCGATCCTTC TGATCTCCTG GGCCTATATC CTGATGATGG GCGGCGCGGG GCTGACGCAG
GCGACGCGCG TCGCGATCCT GAACGCGAAC TATATCGCCA GCCGGCTGGC CGGGGCCTAT
CCGGTGCTGT TCATGGGCAA TCGCGGCCGG GTGGCGCATG AATGCATCCT GGATACGCGA
CCTTTCCAGG AGCATGGCGT GACCGTGGAC GACATCGCCA AGCGGTTGAT CGACAACGGC
TTCCACGCCC CGACCATGAG CTGGCCGGTC GCCGGCACGC TGATGGTCGA GCCGACCGAA
TCGGAGACCA AGGCCGAGAT CGACCGGCTG ATCACCGCCT TCCTGGCGAT CCGCGACGAG
ATCACCGAGA TCGCCGAGGG CCGGATCGGC GCCGAGGCCT CGCCCCTGCG CCACGCGCCG
CACACGGTCG AGGACCTGGT CGCCGATTGG GACCGCGCCT ATTCGCGCGA GCAGGGCTGC
TTCCCGCCCG GGGCCTTCCG CGTGGACAAA TACTGGCCGC CGGTCGGGCG CGTGGACAAT
GCCTATGGCG ACCGCAACCT GGTCTGCACC TGTCCTCCGG TCGAGGATTA TGCCGAAGCG
GCCGAATGA
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| Protein sequence | MGKWTPTDYN PDDFANRRHI GPSPAEMAAM LKVVGAETLE DLIGQTVPAS IRQSESLDWP
ALSEAALLQR MREVAAKNQV MTSLIGQGYY GTVTPPAIQR NILENPAWYT AYTPYQPEIA
QGRLEALLNF QTMVADLTGL PVANASLLDE ATAAAEAMAM AQRVAKSKAR AFFVSENLHP
QTIAVIETRA EPLGIEIVRG LECDPSQVFG AIFQYPGTFG EVRDYAAEIA ALHAAGAVAI
MATDLLALCV LKEPGAMGAD IAIGSAQRFG VPMGYGGPHA GFMACRDEMK RAMPGRIVGV
SVDAKGNRAY RLSLQTREQH IRREKATSNV CTAQALLAVM AGFYAVFHGP VGLRAIAQRV
HLNAATLADA LRAAGAEVQS DAFFDTITVR VGVGQAGILA AARHRGINLR KVGRDRVGIS
VDETTDADVI ARVLDAFGIT DPAEPAKAPA IPEALIRESD YLTHPVFHMN RAESEMMRYM
RRLSDRDLAL DRAMIPLGSC TMKLNAAAEM MPITWPEFGA LHPFAPEDQA AGYHEVFADL
TEKLCAITGY DAFSLQPNSG AQGEYAGLLT IAAYHKSRGE DRDICLIPVS AHGTNPASAQ
MAGMKVVVVK SAPNGDIDLE DFADKAAKAG DRLAAVMITY PSTHGVFEDT VREVCRIAHD
HGGQVYIDGA NMNALVGLVR PGEIGGDVSH LNLHKTFAIP HGGGGPGMGP IGVKAHLAPF
LPADPREGSG AVSAAPWGSA SILLISWAYI LMMGGAGLTQ ATRVAILNAN YIASRLAGAY
PVLFMGNRGR VAHECILDTR PFQEHGVTVD DIAKRLIDNG FHAPTMSWPV AGTLMVEPTE
SETKAEIDRL ITAFLAIRDE ITEIAEGRIG AEASPLRHAP HTVEDLVADW DRAYSREQGC
FPPGAFRVDK YWPPVGRVDN AYGDRNLVCT CPPVEDYAEA AE
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