Gene Pden_2324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2324 
Symbol 
ID4579377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2322156 
End bp2323352 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content72% 
IMG OID639769654 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_916111 
Protein GI119385055 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCG TGATCCTTGG CGCGGGGCAG GCGGCGGCCT CTCTGGCGGC GAAACTGCGC 
GCGCTGGGGC ATGATGGCGG CATCGCCATC ATCGGCGACG AGCCCGCGCC GCCCTATCAG
CGCCCGCCCT TGTCCAAGGC TTACCTGCTG GGCGAGATGG GGCTGGACCG GCTGACGCTG
CGCGCCCCGG AATGGTGGGA CGAACAGGGC ATCGCCCTGC ATCTGGGGGA ACGCGCGACG
CGCATCGACC GCGACCGCCG CGTGGTGGCG ACGGGTCGCG GCGAATATCC CTATGACCAG
CTTGTCCTGA CGCTGGGCGC CGCGCCCCGC CGCCTGCCCG CCACGATGGG CGGCGACCTG
ACGGGGGTGC ATGTGGTGCG CAACCTTGCC GACATCGCGG GGGTGCAGCC GGCGCTGGTC
GCCGGGCGCC GTCTGGTGGT GATCGGCGGC GGCTATATCG GGCTGGAGGC CGCTGCGGTG
GCCCGCAAGC TGGGGCTGGA GGTCACGCTG GTCGAGGCGG CGCCGCGCAT CCTGGGCCGC
GTCGCCGCGC CCGAGACCGC GGACATGATT CGCGCCCTGC ACCGTGCCCA TGGCGTCGGG
ATCGTCGAGG GCACCGGCAT CGCCCGCATC ACCGGGGAAA CCGCTGCCGA TGGCGTGGAA
CTGGCCGACG GCCGCCGCCT GTCGGCCGAT CTGGTGATCT GCGGCATCGG CATCGCGCCC
GAGACCGCGC TGGCCGAGGC GGCGGGGCTG GCAATCGACA ACGGCATTGC CGTGGATGCG
CTTGGCCGCA CATCGGACCC GGCGATCTGG GCGGCGGGCG ATTGCGCCAG CTTTCCAGTG
ACGGGTGGGC GGCTGCGGCT GGAAAGCGTC GGCAATGCCA TCGACATGGC CGAGGCGGTG
GCGGCGAACA TGCTGGGCGC CGATGCCGCC TATGTGCCGA AGCCGTGGTT CTGGTCGGAC
CAGTTCGACG CCAAGTTGCA GATCGCCGGG CTGAACCTGG ATTACGACCG GGTGGTGACC
CGGCCCGCGG CGAATGGCGG CTCGGTCTGG TATTACCGCG ACGGCCGGCT GATCGCGGTG
GACGCGCTGA ACGACGCCCG CGCCTATATG ATCGGCAAGC GGCTGATCGA GGCCGGCCGC
TCGCCCAGCC CCGAAGCCGT GGCCGAGGCG GTCGAGCTGA AGGCGCTGAT GGCATGA
 
Protein sequence
MNIVILGAGQ AAASLAAKLR ALGHDGGIAI IGDEPAPPYQ RPPLSKAYLL GEMGLDRLTL 
RAPEWWDEQG IALHLGERAT RIDRDRRVVA TGRGEYPYDQ LVLTLGAAPR RLPATMGGDL
TGVHVVRNLA DIAGVQPALV AGRRLVVIGG GYIGLEAAAV ARKLGLEVTL VEAAPRILGR
VAAPETADMI RALHRAHGVG IVEGTGIARI TGETAADGVE LADGRRLSAD LVICGIGIAP
ETALAEAAGL AIDNGIAVDA LGRTSDPAIW AAGDCASFPV TGGRLRLESV GNAIDMAEAV
AANMLGADAA YVPKPWFWSD QFDAKLQIAG LNLDYDRVVT RPAANGGSVW YYRDGRLIAV
DALNDARAYM IGKRLIEAGR SPSPEAVAEA VELKALMA