Gene Pden_2300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2300 
Symbol 
ID4579353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2297697 
End bp2298494 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content67% 
IMG OID639769630 
Product3'(2'),5'-bisphosphate nucleotidase 
Protein accessionYP_916087 
Protein GI119385031 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 
TIGRFAM ID[TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.237358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.187754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTCG ATCGAATGAT TGCCGAAATG CGACGTCTCG CCCTGCGCGC CGGCGACGAG 
ATCATGAAGA TCTACGGTGC CGAGGATTTC GACGTGCGCG CGAAGGCCGA CGCCTCGCCC
GTGACCGAGG CCGACGAGGC CGCCGATGCG CTGATTTCGG CCGGGCTGCG CGCTGCATTC
CCCGACATCC CGCTGGTGAC CGAGGAACAG GCCGAGACCC ACGGCCAAAG CCTGTCGACC
TTTCTGATCG TCGATCCGCT GGACGGCACC AAGGAATTCG TGCAGCGCCG CGGCGACTTC
ACCGTCAACA TCGCCTATGT CGAGAACGGC GTGCCGCGGC TGGGCGTGGT CTATGCGCCG
GCCAAGGGGC GGCTGTTCTA CACCACCGCG CAGGGCGGCT CGGTCGAGGA AAAGGGCCCC
TTCGGCGAAG AGCCGGGCGA GGTCACGCCC ATCGGCGTCA ATTCCATGCC TGACAACCGG
GCGCTGATGG TCGTCGCCTC GAAATCGCAT CGCGACGCGG CGACCGACGC CTATATCGCC
CGCTACGGCG TGCGCGACAT GACCTCGGCG GGCAGCTCGC TGAAATTCTG CCTGGTGGCG
ACGGGCGAGG CCGATCTCTA CCCGCGGCTG GGCCGCACCA TGGAATGGGA CACCGCCGCC
GGCGACGCCG TGCTGCGCGG CGCGGGGGGC GAGGTGGTGC GTTTCGACGA CCATGCCGCC
CTGGCCTATG GCAAGCCGGG ATTCGAAAAC CCGTTCTTCA TCGCCTTCGC CCCGGGCGTG
CTGCTGGTCA AGGATTGA
 
Protein sequence
MQFDRMIAEM RRLALRAGDE IMKIYGAEDF DVRAKADASP VTEADEAADA LISAGLRAAF 
PDIPLVTEEQ AETHGQSLST FLIVDPLDGT KEFVQRRGDF TVNIAYVENG VPRLGVVYAP
AKGRLFYTTA QGGSVEEKGP FGEEPGEVTP IGVNSMPDNR ALMVVASKSH RDAATDAYIA
RYGVRDMTSA GSSLKFCLVA TGEADLYPRL GRTMEWDTAA GDAVLRGAGG EVVRFDDHAA
LAYGKPGFEN PFFIAFAPGV LLVKD