Gene Pden_2258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2258 
Symbol 
ID4579312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2259661 
End bp2260407 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content65% 
IMG OID639769588 
Producthypothetical protein 
Protein accessionYP_916046 
Protein GI119384990 
COG category[S] Function unknown 
COG ID[COG3820] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.218944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGC CGCTGATGGC CAAGGCCACT GCCGTCTGGC TGGTCGACAA CACGACGCTG 
AGCTTCAAGC AGATCGCCGA TTTCTGCGGC ATGCACGAGC TTGAGGTCCA GGGCATCGCC
GATGGCGACG TGGCCGTCGG CGTCAAGGGC TTCGACCCGG TCGCCTCAAA CCAGCTCGAC
GCGTCCGAGA TCGAAAAGGG CCAGAAGGAC CCGCGCCACA AGCTGAAGCT GAAGCGCAAC
CCCGCCGCCG AGGGCGAGGA AAAGCGCCGC GGCCCGCGCT ACACCCCGCT GTCCAAGCGC
CAGGACCGGC CTGCCGCCAT CCTGTGGCTG GTCAAGTTCC ACCCGGAACT GGCCGATTCG
CAGATCGCCA AGCTGGTGGG CACGACCAAG CCGACCATCG CCTCGATCCG CGACCGGACG
CATTGGAACA TCCAGAACAT CCAACCCATC GATCCGGTGG CGCTGGGGCT TTGCCGGCAG
TCCGAACTGG ACGCCGCCGT GCAAAAGGCT GCGAAGCGCA AGGCGGCCGA AGGCGGCGCG
ATGACCGATG ACGAGCGGCG CAAGCTGCTT TCGACCGAAA CCTCGCTGGC CATGTCGGAC
GAACCCCGGC TGCCGTCCTC GATCGCCGGG CTGGAGAATT TCAGCCTGAC CCGCGACGAG
GAAAGCGAGG CGCAGAACGA CAAGCTGGAT GCCGACAGCT TCTTCAACCT GCCCGAAGCG
GATGACGACG AGGACGAGGA TCACTGA
 
Protein sequence
MNKPLMAKAT AVWLVDNTTL SFKQIADFCG MHELEVQGIA DGDVAVGVKG FDPVASNQLD 
ASEIEKGQKD PRHKLKLKRN PAAEGEEKRR GPRYTPLSKR QDRPAAILWL VKFHPELADS
QIAKLVGTTK PTIASIRDRT HWNIQNIQPI DPVALGLCRQ SELDAAVQKA AKRKAAEGGA
MTDDERRKLL STETSLAMSD EPRLPSSIAG LENFSLTRDE ESEAQNDKLD ADSFFNLPEA
DDDEDEDH