Gene Pden_2237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2237 
Symbol 
ID4579291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2240048 
End bp2240440 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content68% 
IMG OID639769567 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_916025 
Protein GI119384969 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.309051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG ACGCCGCATA TCAGCGCGGC CGCGCCCTGG CCGAGCATCT CAATCCGGGG 
ATGGAGGTGG CCCTGCGCGA CCGCTATGGC CGCTGGCTGC CCGATGCGGT GGCCGAAACG
GTCGTGGGTC ACGGGATGGG CGAGGTCTAT GCGCGCGAGG GGCTGGATCT GAAGACCCGG
CTGCTGGTCA CCGTCGGCGC ATTGGCGGCG ATGGGCGGGC AGACCCGGCC GCAGCTCAAG
GTGAACGTGG CCTCGGCCCT GCGCGCGGGC GCAAGCGCGC GGGAAATCTG CGAGGCGATC
TTCCAGATGC ACCTCTATGG CGGGATGCCG GCGGCGATCA ACGCGTTGAA CGCCGCCATC
GAGGTTTTCG AAGCGGAAGG AACAAGTCCA TGA
 
Protein sequence
MTADAAYQRG RALAEHLNPG MEVALRDRYG RWLPDAVAET VVGHGMGEVY AREGLDLKTR 
LLVTVGALAA MGGQTRPQLK VNVASALRAG ASAREICEAI FQMHLYGGMP AAINALNAAI
EVFEAEGTSP