Gene Pden_2235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2235 
Symbol 
ID4579289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2239048 
End bp2239647 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content65% 
IMG OID639769565 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_916023 
Protein GI119384967 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.338897 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCG CTTTCTACCT GTTCGCGATC AGCGCCTGCG TCGCCGGGTT CATGGTCGTG 
ATCGGCCGCA ACCCGGTGCA TTCGGTGTTG TGGCTGATCC TGGCCTTCCT GTCCGCGGCG
GGGCTGTTCG TGCTGCAAGG CGCGGAGTTC GTCGCCATGC TGCTGGTCGT GGTCTATGTC
GGCGCCGTGG CGGTGCTGTT CCTGTTCGTC GTCATGATGC TGGACGTGGA TTTCGCCGAG
CTGAAGGGCG AACTGGCGCG CTACCTGCCG CTGGCGCTGG TGATTGGCGT CGTGCTGCTG
GCGCAACTGG GCATCGCCTT CTCGGGCTGG ACGCCCTCGG ACCAGGCCGA AAGCCTGCGC
GCCGCTCCGG TGGATGCGGC GGTCGAGAAC ACCCTGGGCC TCGGCCTCGT GCTTTACGAC
CGCTATGTGC TGATGTTCCA GCTTGCCGGC CTGGTGCTGC TGGTGGCGAT GATCGGGGCG
ATCGTGCTGA CCATGCGCCA CCGCAAGGAC GTCAAGCGCC AGAACGTGCT GGAACAGATG
TGGCGCGACC CGGCCAAGAC GATGGAATTG AAGGACGTGA AGCCGGGGCA GGGGCTTTGA
 
Protein sequence
MTFAFYLFAI SACVAGFMVV IGRNPVHSVL WLILAFLSAA GLFVLQGAEF VAMLLVVVYV 
GAVAVLFLFV VMMLDVDFAE LKGELARYLP LALVIGVVLL AQLGIAFSGW TPSDQAESLR
AAPVDAAVEN TLGLGLVLYD RYVLMFQLAG LVLLVAMIGA IVLTMRHRKD VKRQNVLEQM
WRDPAKTMEL KDVKPGQGL