| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2233 |
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| Symbol | |
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| ID | 4579287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2236525 |
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| End bp | 2238636 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639769563 |
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| Product | NADH dehydrogenase subunit L |
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| Protein accession | YP_916021 |
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| Protein GI | 119384965 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.441598 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAAT TCGTCCTCTT TGCGCCGCTC ATCGCGTCGC TGATCGCCGG GCTGGGCTGG
CGGGCGATCG GCGAGAAGGC AGCGCAATAC CTGACCACGG GCGTGCTGTT CCTCAGCTGC
CTGATCAGCT GGTACCTGTT TCTGTCCTTC GACGGCGTGC CGCGGCATAT CCCGGTGCTC
GACTGGGTCG TGACCGGCGA TTTCCATGCC GAATGGGCGA TCCGGCTGGA CCGGCTGACC
GCGATCATGC TGATCGTCGT GACCACCGTT TCGGCGCTCG TGCACATGTA TTCGCTGGGC
TACATGGCCC ATGACGACAA CTGGACGCAT GACGAGCACT ACAAGGCCCG CTTCTTCGCC
TATCTCTCGT TCTTCACCTT CGCCATGCTG ATGCTGGTGA CGGCGGACAA CCTGTTGCAG
ATGTTCTTCG GCTGGGAGGG CGTGGGCGTC GCCTCCTACC TACTGATCGG ATTCTACTAC
AAGAAGGCCA GCGCCAATGC CGCGGCGATG AAGGCGTTCA TCGTCAACCG GGTCGGCGAC
TTCGGCTTCC TGCTGGGTAT CTTCGGCATC TACTGGCTGA CCGGCTCGGT CCAGTTCGAC
GAGATCTTCC GCCAGGTGCC GCAGCTCGCG CAGACCGAGA TGCATTTCCT GTGGCGCGAC
TGGAACGCCG CGAACCTGCT GGGTTTCCTG CTGTTCGTCG GCGCCATGGG CAAGTCGGCG
CAGCTCTTGC TGCACACCTG GCTGCCGGAC GCGATGGAAG GCCCGACCCC GGTTTCGGCG
CTGATCCATG CCGCGACCAT GGTGACGGCC GGCGTGTTCC TGGTCTGCCG CATGTCGCCG
CTTTACGAAT TCGCGCCGGA TGCCAAGAAC TTCATCGTCA TCATCGGCGC CACCACCGCC
TTCTTCGCCG CGACCGTCGG CCTGGTGCAG AACGACATCA AGCGCGTCAT CGCCTATTCG
ACCTGTTCGC AGTTGGGCTA CATGTTCGTG GCGGCGGGTG TCGGCGTCTA TTCGGCGGCC
ATGTTCCACC TGCTGACGCA CGCTTTCTTC AAGGCCATGC TGTTCCTGGG CGCCGGCTCG
GTGATCCATG CCATGCACCA TGAACAGGAC ATGCGGAACT ATGGCGGGCT GCGGAAGAAG
ATCCCGCTGA CCTTCTGGGC GATGATGATC GGCACCTTCG CCATCACCGG CGTCGGCATT
CCGCTGACCC ACCTGGGCTT TGCCGGTTTC CTGTCCAAGG ACGCGATCAT CGAAAGCGCC
TATGCGGGCA GCGGCTATGC CTTCTGGCTG CTGGTCATCG CGGCCTGTTT CACCAGCTTC
TACAGCTGGC GGCTGATCTT CCTGACCTTC TACGGCAAGC CGCGCGGCGA CCATCACGCC
CATGATCATG CGCATGAAAG CCCGCCGGTG ATGACGATCC CGCTGGGCGT GCTGGCCATC
GGCGCGGTCT TTGCCGGCAT GGTCTGGTAT GGTCCCTTCT TCGGCGACCA TCACAAGGTC
ACGGAATATT TCCACATCGC CGGCGCGCAT CACGAAGCGG CCGAGGGCGA AGAAGCAGAG
CACGCGACCG CCGAGGCTCC GGTGGAGCAC GCCGTCGCCG ATACCGCGAC CGCCGAGGGC
GAAGCGGCCG CCGAGGCCGA ACATGCCGAG ATCGCCGCGC CGGTCGGCGG TGCGATCTAC
ATGCATCCCG ACAACCACAT CATGGACGAG GCGCACCATG CGCCGGCCTG GGTGAAGGTC
TCGCCCTTCG TCGCCATGGT GCTGGGGCTG ATCACCGCCT GGACATTCTA CATCGCCAAC
CCGTCGCTGC CGCGGCGGCT GGCGGCGCAG CAGCCGGCGC TGTATCGGTT CCTGCTCAAC
AAATGGTATT TCGACGAGAT CTACGAGTTC ATCTTCGTCC GCCCGGCGAA ATGGCTTGGC
CGCGTGCTGT GGAAGGGCGG CGACGGCGCC GTCATCGACG GCACCATCAA CGGGGTGGCC
ATGGGCTTGA TCCCGCGGCT GACCCGCGCG GCGGTCCGGG TGCAATCGGG CTATCTGTTC
CACTACGCCT TCGCGATGGT TCTGGGCATC GTGGGCTTGC TGATCTGGGT GATGATGCGG
GGCGCGCACT GA
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| Protein sequence | MEKFVLFAPL IASLIAGLGW RAIGEKAAQY LTTGVLFLSC LISWYLFLSF DGVPRHIPVL
DWVVTGDFHA EWAIRLDRLT AIMLIVVTTV SALVHMYSLG YMAHDDNWTH DEHYKARFFA
YLSFFTFAML MLVTADNLLQ MFFGWEGVGV ASYLLIGFYY KKASANAAAM KAFIVNRVGD
FGFLLGIFGI YWLTGSVQFD EIFRQVPQLA QTEMHFLWRD WNAANLLGFL LFVGAMGKSA
QLLLHTWLPD AMEGPTPVSA LIHAATMVTA GVFLVCRMSP LYEFAPDAKN FIVIIGATTA
FFAATVGLVQ NDIKRVIAYS TCSQLGYMFV AAGVGVYSAA MFHLLTHAFF KAMLFLGAGS
VIHAMHHEQD MRNYGGLRKK IPLTFWAMMI GTFAITGVGI PLTHLGFAGF LSKDAIIESA
YAGSGYAFWL LVIAACFTSF YSWRLIFLTF YGKPRGDHHA HDHAHESPPV MTIPLGVLAI
GAVFAGMVWY GPFFGDHHKV TEYFHIAGAH HEAAEGEEAE HATAEAPVEH AVADTATAEG
EAAAEAEHAE IAAPVGGAIY MHPDNHIMDE AHHAPAWVKV SPFVAMVLGL ITAWTFYIAN
PSLPRRLAAQ QPALYRFLLN KWYFDEIYEF IFVRPAKWLG RVLWKGGDGA VIDGTINGVA
MGLIPRLTRA AVRVQSGYLF HYAFAMVLGI VGLLIWVMMR GAH
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