Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2232 |
Symbol | |
ID | 4579286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 2234982 |
End bp | 2236523 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639769562 |
Product | NADH dehydrogenase subunit M |
Protein accession | YP_916020 |
Protein GI | 119384964 |
COG category | [C] Energy production and conversion |
COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.976155 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAACC TTCTTTCCAT CATCACCTTC CTGCCGATCG TCGCCGCCAT CATCATGGCG CTGTTCCTGC GCGGCCAGGA CGAGGCCGCG GCGCGCAACG CCAAATGGCT GGCGCTGCTG ACCACCACGG CGACCTTCGT GATCTCGCTT TTCGTGCTGT TCCGCTTCGA CCCGGCGAAC ACCGGCTTCC AGTTCGTCGA GGATCACGCC TGGATCATGG GGCTGCGCTA CAAGATGGGC GTGGACGGCA TCTCGGTGCT GTTCGTGCTG CTGACCACCT TCATGATGCC GCTGACCATC CTTTCGACCT GGCAGGTCCA GGACAAGGTC AAGGAATACA TGATCGCCTT CCTGGTGCTG GAAGGGCTGA TGATCGGCGT CTTCACCGCG CTCGATCTGG TGCTGTTCTA CCTGTTCTTC GAGGCGGGGC TGATCCCGAT GTTCCTGATC ATCGGCATCT GGGGCGGCAA GGACCGCATC TATGCGTCCT TCAAGTTCTT CCTCTACACC TTCCTCGGCT CGGTGCTGAT GCTGGTGGCG ATGATCGCCA TGTATCGCAT GGCGGGCACC ACCGACATCC CGACGCTGCT GACCTTCGAC TTCCCGTCCG AGAACTTCCG CCTCTTGGGC ATGACCGTGG TCGGCGGCAT GCAGATGCTG CTGTTCCTGG CCTTCTTTGC CAGCTTCGCG GTCAAGATGC CGATGTGGCC GGTCCATACC TGGCTGCCCG ACGCGCACGT CCAGGCGCCG ACCGCCGGCT CGGTCCTGCT GGCCGCGGTG CTGCTGAAGA TGGGCGGCTA CGGCTTCCTG CGCTTCTCGC TGCCGATGTT CCCGGTCGCC AGCGGCGTGG CCCAGCCCTA TGTCTTCTGG CTGTCGGCCA TCGCCATCGT CTACACTTCG CTGGTGGCGC TGGCGCAGTC GGACATGAAG AAGGTCATCG CCTATTCCTC GGTCGCCCAT ATGGGCTACG TGACCATGGG CGTCTTTGCC GCGAACCAGA TCGGCGTCGA CGGCGCGATC TTCCAGATGC TGTCGCACGG CTTTATCTCG GGCGCGCTGT TCCTGTGCGT CGGCGTGATC TACGACCGCA TGCACACGCG CGAGATCGAC GCCTATGGCG GGTTGGTGAA CCGGATGCCG GCCTATGCGG CGGTGTTCAT GTTCTTCACC ATGGCGAACG TGGGCCTGCC GGGCACCTCG GGTTTCGTGG GCGAGTTCCT GACGCTGATG GGGGTCTTCC GCGTCGATAC CTGGGTGGCG CTGGTCGCGA CCTCGGGGGT GATCCTGTCG GCGGCCTATG CGCTCTGGCT GTATCGCCGG GTGACGCTGG GCCAGCTCAT CAAGGAAAGC CTCAAGTCGA TCACCGACAT GACCCCGCGC GAACGCTGGG TGTTCATCCC GCTGATCGCC ATGACGCTGA TCCTGGGCGT CTATCCGCGG CTCGTCACCG ACGTGACCGG CCCGGCGGTC GCAGCACTCG TGCAAGACTA CAACCAGAGC CAGCCGGCGG CACCCGTCGC CACGGCCCAA GCCAGCCACT AG
|
Protein sequence | MTNLLSIITF LPIVAAIIMA LFLRGQDEAA ARNAKWLALL TTTATFVISL FVLFRFDPAN TGFQFVEDHA WIMGLRYKMG VDGISVLFVL LTTFMMPLTI LSTWQVQDKV KEYMIAFLVL EGLMIGVFTA LDLVLFYLFF EAGLIPMFLI IGIWGGKDRI YASFKFFLYT FLGSVLMLVA MIAMYRMAGT TDIPTLLTFD FPSENFRLLG MTVVGGMQML LFLAFFASFA VKMPMWPVHT WLPDAHVQAP TAGSVLLAAV LLKMGGYGFL RFSLPMFPVA SGVAQPYVFW LSAIAIVYTS LVALAQSDMK KVIAYSSVAH MGYVTMGVFA ANQIGVDGAI FQMLSHGFIS GALFLCVGVI YDRMHTREID AYGGLVNRMP AYAAVFMFFT MANVGLPGTS GFVGEFLTLM GVFRVDTWVA LVATSGVILS AAYALWLYRR VTLGQLIKES LKSITDMTPR ERWVFIPLIA MTLILGVYPR LVTDVTGPAV AALVQDYNQS QPAAPVATAQ ASH
|
| |