Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2224 |
Symbol | |
ID | 4579200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 2223617 |
End bp | 2225896 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639769554 |
Product | malic enzyme |
Protein accession | YP_916012 |
Protein GI | 119384956 |
COG category | [C] Energy production and conversion |
COG ID | [COG0280] Phosphotransacetylase [COG0281] Malic enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGAAC GCAGACAGGA CAACGCCCGG CAGGCGGCAT TGGATTATCA CGAATTCCCG CGCCCGGGTA AGCTCGAGGT GCGCGCGACC AAGCCCCTTG CCAACGGCCG CGACCTGAGC CGCGCCTATT CGCCCGGCGT GGCGGAAGCC TGCCTGGACA TCAAGGCCGA CCCCGCCGCC GCCGCCCGCT ATACCGCGCG CGGCAACCTC GTCGCCGTGG TTTCGAACGG CACCGCCGTC CTGGGGCTGG GCAATATCGG CGCACTGGCC TCGAAGCCGG TGATGGAGGG CAAGGCGGTC CTGTTCAAGA AGTTCGCCAA TATCGACTGC TTCGACATCG AGCTGAACCA GCCCGACCCC GAGAAGCTGG CCGAGATCGT CTGCGCGCTG GAGCCGACCT TCGGCGCCAT CAACCTCGAG GACATCAAGG CGCCCGACTG CTTCATCGTC GAGAAGCTGT GCCGCGAACG CATGAACATC CCGGTCTTTC ACGACGACCA GCACGGCACC GCCATCGTCG TCGGCGCCGC CGCGACCAAC GCGCTGCATA TCGCCCACAA GCGGTTCGAG GACATCAAGG TCGTCTCGAC CGGCGGCGGC GCGGCCGGCA TCGCATGCCT CAACATGCTG CTGAAGCTGG GCGTGAAGCG CGAGAACGTC TGGCTGTGCG ACATCGCCGG CCTGGTCCAC GAGGGCCGGA CCGAGGAAAT GACCCCGCAA AAGGCGGAAT ATGCGCAGAA ATCCGACCTG CGCACGCTGG ATGAGGCGAT CGAGGGCGCG GACCTGTTCC TGGGCCTGTC CGGCCCCGGC GTGCTCAAGC CGCATATGGT GGCCAAGATG GCCAAGCGCC CGATCATCTT CGCGCTGGCC AACCCCACCC CCGAGATCCT GCCCGAGGAT GCCCGCGCCG TCGCGCCCGA TGCGATCATC GCCACCGGCC GCAGCGACTA TCCCAACCAG GTCAACAACG TCCTGTGCTT CCCCTTCATC TTCCGCGGCG CGCTGGACGT GGGCGCAACC ACGATCAACG ACGAGATGCA GCTGGCCTGC ATCGAGGGCA TCGCCGCGCT TGCCCGCGCC ACCACCAGCG CCGAGGCGGC GATGGCCTAT CGCGGCGAGA AGATGAGCTT CGGCGCCGAC TACCTGATCC CGAAACCCTT CGATCCGCGG CTGATCGGCG TGGTCTCGAC CGCCGTGGCC CGGGCCGCGA TGGAAACCGG CGTGGCCACC CGGCCGCTGG ACGACATCGC CGCCTACAAG CGCGCGCTGG ACGGCTCGGT CTTCCGTTCG GCGATGATCA TGCGCCCGGT CTTCGAGGCG GCCGCCACCG CCAAGCGCCG CATCGTCTTT GCCGAGGGCG AGGATGAGCG CGTGCTGCGC GCCGCCAACG CCATGCTGGA GGAAACCACC GACGCGCCGA TCCTGATCGG CCGCCCCGAG GTGATCGAAA GGCGCGCCGA ACGCGCCGGC CTGCCGATCC GCCCCGGCCG CGACTTCGAG ATCGTGAACC CGGAAAACGA CCCGCGCTAT CGCGACTATT GGGGCACCTA TCACGAGCTG ATGGCCCGGC GCGGCGTCAC GCCCGACATC GCCCGTGCCA TCATGCGCAC CAACACCACC GCCATCGGCG CCGTCATGGT CCACCGGGGC GAGGCCGACA GCCTGATCTG CGGCACCTTC GGGCAATACA GCTGGCACCT GAACTATGTC AGCCAGGTGC TGGCGCGCGA CGGGCTGCGG CCGCAGGGCG CGCTGTCGCT GATGATCCTC GAGGACGGGC CGCTGTTCAT CGCCGACACC CAGGTGACCC ATTCCCCCAC CCCCGAGCAG GTGGCCGAGG CCGCCATCGG CGCCGCCCGC CATGTGCGCC GCTTCGGCGT GACGCCCAAG GTCGCGCTGT GCAGCCATTC GCAATTCGGC AACCTGGACA CCGACTCGGG CCGCAAGATG CGCGCGGCGG TCGAGATCCT GCATGCGCGC GGCGTCGATT TCATCTTCGA CGGCGAGATG CATGTGGACT CGGCGCTGGA CCCGACGATC CGCGAGCGGC TGCTGCCGCA TTCCCGGATC GAAGGCGCGG CCAACGTGCT GGTCTTTTCG GGCACCGACT CGGCTTCGGG CGTGCGCAAC GCGCTCAAGC TCAAGGCCAA CGGGCTGGAG GTCGGGCCGA TCCTGATGGG CATGGGCAAT CGCGCCCATA TCGTGACGCC CTCGATCACC ACCCGCGGGC TGCTGAACAT GAGCGCGATC GCCGGCACCC CGGTCGATCA CTACAGGTAA
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Protein sequence | MEERRQDNAR QAALDYHEFP RPGKLEVRAT KPLANGRDLS RAYSPGVAEA CLDIKADPAA AARYTARGNL VAVVSNGTAV LGLGNIGALA SKPVMEGKAV LFKKFANIDC FDIELNQPDP EKLAEIVCAL EPTFGAINLE DIKAPDCFIV EKLCRERMNI PVFHDDQHGT AIVVGAAATN ALHIAHKRFE DIKVVSTGGG AAGIACLNML LKLGVKRENV WLCDIAGLVH EGRTEEMTPQ KAEYAQKSDL RTLDEAIEGA DLFLGLSGPG VLKPHMVAKM AKRPIIFALA NPTPEILPED ARAVAPDAII ATGRSDYPNQ VNNVLCFPFI FRGALDVGAT TINDEMQLAC IEGIAALARA TTSAEAAMAY RGEKMSFGAD YLIPKPFDPR LIGVVSTAVA RAAMETGVAT RPLDDIAAYK RALDGSVFRS AMIMRPVFEA AATAKRRIVF AEGEDERVLR AANAMLEETT DAPILIGRPE VIERRAERAG LPIRPGRDFE IVNPENDPRY RDYWGTYHEL MARRGVTPDI ARAIMRTNTT AIGAVMVHRG EADSLICGTF GQYSWHLNYV SQVLARDGLR PQGALSLMIL EDGPLFIADT QVTHSPTPEQ VAEAAIGAAR HVRRFGVTPK VALCSHSQFG NLDTDSGRKM RAAVEILHAR GVDFIFDGEM HVDSALDPTI RERLLPHSRI EGAANVLVFS GTDSASGVRN ALKLKANGLE VGPILMGMGN RAHIVTPSIT TRGLLNMSAI AGTPVDHYR
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