| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2222 |
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| Symbol | deoA |
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| ID | 4579198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2221769 |
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| End bp | 2223061 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639769552 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_916010 |
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| Protein GI | 119384954 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCTG CCGGCCCCGG CCACGACCCG CGTCCGGTGA TCGCCGCCGT TCGCGACGGG
CGCGGGCTGG ACGCGGCGGG CGCGGCGCTG GTCGCGCGCG GCCTGGCCGA CGGTTCGGTC
AGCGATGCGC AGGCCGCGGC CTTTGCCATG GCGGTGCTGA CGCGCGGTCT GGACGAGGCG
GGGCGGGTGG CGTTGACCCG GGCCATGCGC GATTCCGGCC ATGTGCTGCG CTGGGATCTG
CCGGGGCCGG TGGTGGACAA GCATTCGACC GGCGGCATCG GCGATGCGGT CAGCCTGATC
CTGGCCCCGC TGGTGGCGAG TTGCGGCGCC TATGTGCCGA TGATCTCGGG GCGCGGGCTG
GGCCATACCG GCGGCACGCT GGACAAGCTG GAGGCGATCC CCGGCTTCCG CACCGCGCTG
TCCGAGGACG ATTTCCGCCG CGTGGTGGCC GAGGTCGGCT GCGCCATCGT CGCGGCCGGG
CCGGAACTGG CGCCGGCCGA TGCGCGGCTT TACGCGATCC GCGACGAAAG CGCGACGGTG
GGCTCGATCG ACCTTATCAC CGCCTCGATC CTGTCCAAGA AGCTGGCGGC GGGGCTGGAT
GCGCTGGTGC TGGACGTCAA GCAAGGCAGC GGCGCCTTTC TGCGCAGCCC GGATGCGGCG
CTGGCGCTGG CCCGCGCGCT GGTCGATACC GCGAAGGGTG CCGGCTGCCG CACCCGCGCC
TATGTCACCG ACATGGATCA GCCGCTGGCG CGCGCCGCCG GCAATGCGCT GGAACTGCGC
GAGGCCATCG CCGTGCTCAC GGGCGAACAG GGGGCGTTGC GCGACCTGTC GCTGGCGCTG
TCCTCGGCCT GCCTCGATCT TGGCGGCTTG GCCGACGGCG CCTTGCGGGC GCTGGACGGC
GGCGCCGCGG CCGAGCGTTT CGCTCGCATG GTGGTCGCGC AGGGCGGGCC GGCCGACCTG
CTCGAACATC CCGAGCGCCA CCTGCCGCCC GCGCCGGTGG TGCGCGCCGT GCCCGGCCAT
GGCCGCGTCG TCGCCATCGA TACCGAGGTG CTGGGCCATG CCGTGGTGGC GCTGGGCGGT
GGGCGGCTGC ATGCCGGTGA CCGGATCGAC CCTCGGGTGG GGCTTGCGGA ACTGCTCCGC
ATCGGCGAGG AGGCGGGTCC GGGTCGTCCC CTGGCGCTGG TCCATGCCGC TTCCGATGCG
GCGGCCGATG CGGCGGTCGC CACTGTCGCG GCCGCCTATC TGCTGGGCGA TGGCCCGGAG
CCCGGCCCAT TGATCCGCAG CGAGGTAACA TGA
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| Protein sequence | MSPAGPGHDP RPVIAAVRDG RGLDAAGAAL VARGLADGSV SDAQAAAFAM AVLTRGLDEA
GRVALTRAMR DSGHVLRWDL PGPVVDKHST GGIGDAVSLI LAPLVASCGA YVPMISGRGL
GHTGGTLDKL EAIPGFRTAL SEDDFRRVVA EVGCAIVAAG PELAPADARL YAIRDESATV
GSIDLITASI LSKKLAAGLD ALVLDVKQGS GAFLRSPDAA LALARALVDT AKGAGCRTRA
YVTDMDQPLA RAAGNALELR EAIAVLTGEQ GALRDLSLAL SSACLDLGGL ADGALRALDG
GAAAERFARM VVAQGGPADL LEHPERHLPP APVVRAVPGH GRVVAIDTEV LGHAVVALGG
GRLHAGDRID PRVGLAELLR IGEEAGPGRP LALVHAASDA AADAAVATVA AAYLLGDGPE
PGPLIRSEVT
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