| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2221 |
|---|
| Symbol | |
|---|
| ID | 4579197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 2220588 |
|---|
| End bp | 2221772 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639769551 |
|---|
| Product | phosphopentomutase |
|---|
| Protein accession | YP_916009 |
|---|
| Protein GI | 119384953 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1015] Phosphopentomutase |
|---|
| TIGRFAM ID | [TIGR01696] phosphopentomutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.526738 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA GACGCGCCTT CCTGATCGTG ATGGATTCGG TGGGCATCGG CGGGGCACCC
GACGCGAACG CCTATTTCAA CGACGGCCTG CCCGATACCG GCGCCAATAC CGTCGCCCAT
ATCGCGCAGG CGCGGCCGCT GCGGATGCCG CATCTGGACG CGCTGGGCCT TGGCGCCGCG
ATCCGGCTGG CCAGCGGCGA GACGGCGCCG GGCCTCGGCG CCGAGCCGCA GGGGCTGTGG
GGCGCGGCGA CCGAGAGATC GCGCGGCAAG GACACCCCCT CGGGGCATTG GGAGATCGCG
GGCGTCCCCG TGCCCTGGGA CTGGCACTAT TTCCCGAACA CCCGTCCGGC CTTTCCCGCC
GACCTGACCG GGCGTATCGC CCAGGCCGCG GGAACCGAGG GCATCCTCGG CAACGAACAC
GCCTCGGGGA CCGAGATCAT CGCCCGGCTG GGCGCCGAGC ACCTGCGCAC GGGTTGGCCG
ATCTGCTACA CCTCGGCCGA CAGCGTGCTG CAGATCGCCG CGCATGAAGA GGCCTTCGGC
CTCGACCGGC TCCATCGGCT GTGCCGGGAC GTGGCTGCCC TGGTCCATCC GATGCGCGTG
GGCCGGGTCA TCGCCCGGCC CTTCATGGGC GCCGAGGGCG GCTTTGCCCG CACGCCGAAC
CGGCGCGACT ATGCCATCGC CCCGCCCGGG CCGACGCTTC TGGACGTGGC GCAAGATGCA
GGGCGGGCGA CCCATGCCGT GGGCAAGATC GGCGACATCT TCTCGCATCG CGGCATCGGC
AAGCTGCACA AGGGCAAGTC CGACGCCGAT CTGGCCGGCC ATCTGCTGGC CCTGGCGGAC
GAGGCCGAAC CGGGCAGCCT GACATTTGCC AATTTCGTCG AGTTCGACAG CCTTTACGGC
CATCGCCGCG ACGTGGCGGG CTATGCGGCG GCGCTGGAAT GGTTCGACGG CGTGGCGGGC
GCGCTGATCT CGCGCCTGCG GCCGGGCGAT CTGGCGATCT TCACCGCCGA TCACGGCAAC
GATCCGACAT GGCACGGCAC CGACCACACC CGCGAACGCG TGCCGGTGCT GGGCTGGGGC
TGCGGCGCGC GCGGCATCGG CCAGGTCGGT TTCGCCGACA TCGCCGCCTC GGTCGCTGCG
CATCTTGGCC TGCCGCCGGT CGGCCCGGGG AGGTCGTTCC TGTGA
|
|---|
| Protein sequence | MTDRRAFLIV MDSVGIGGAP DANAYFNDGL PDTGANTVAH IAQARPLRMP HLDALGLGAA
IRLASGETAP GLGAEPQGLW GAATERSRGK DTPSGHWEIA GVPVPWDWHY FPNTRPAFPA
DLTGRIAQAA GTEGILGNEH ASGTEIIARL GAEHLRTGWP ICYTSADSVL QIAAHEEAFG
LDRLHRLCRD VAALVHPMRV GRVIARPFMG AEGGFARTPN RRDYAIAPPG PTLLDVAQDA
GRATHAVGKI GDIFSHRGIG KLHKGKSDAD LAGHLLALAD EAEPGSLTFA NFVEFDSLYG
HRRDVAGYAA ALEWFDGVAG ALISRLRPGD LAIFTADHGN DPTWHGTDHT RERVPVLGWG
CGARGIGQVG FADIAASVAA HLGLPPVGPG RSFL
|
|---|
| |