| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2219 |
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| Symbol | upp |
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| ID | 4579195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2218991 |
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| End bp | 2219626 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639769549 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_916007 |
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| Protein GI | 119384951 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.584245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCAAG CGCACCTGAC CGTCGTCGAT CACCCGCTGG TGCAGCACAA GCTGACGCTC
ATGCGCGACA AGACCACCTC GACCGCCGGC TTTCGCCGTC TCCTGCGCGA GATCAGCCTG
CTTCTGGCCT ATGAGGTCAC GCGCGAGCTG GAGATGACCA CGATCCGCAT CGACACCCCG
CTTTGCGAGA TGGAGGCGCC GACGCTGGAA GGCAAGAAGC TGGCGCTGAT CTCGATCCTG
CGGGCCGGCA ACGGGCTCAT GGACGGCATC CTTGAGCTGA TCCCGGCCGC GCGCGTCGGC
TTCATCGGGC TTTACCGCGA CCCCGAGACG CTGCAGCCGG TACAATATTA TTCCAAGGTT
CCCAAGGAAT TGGATGCGCG CATGACCATC GTCGTCGATC CGATGCTGGC GACGGGGAAC
TCGTCCGTCG CGGCTATCGA CCTGCTCAAG GCGGCAGGCG CGCGCAACCT GCGCTTCCTG
TGCCTGCTCG CCTCGCCCGA GGGGGTCGAG CGGATGCGCG AGGCCCACCC CGACGTGCCG
ATCGTGACCG CCGCGCTGGA CGAGCGGCTG GACGAGCACG GCTATATCGT GCCGGGCCTG
GGCGATGCCG GCGACCGCAT GTTCGGCACG AAATGA
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| Protein sequence | MTQAHLTVVD HPLVQHKLTL MRDKTTSTAG FRRLLREISL LLAYEVTREL EMTTIRIDTP
LCEMEAPTLE GKKLALISIL RAGNGLMDGI LELIPAARVG FIGLYRDPET LQPVQYYSKV
PKELDARMTI VVDPMLATGN SSVAAIDLLK AAGARNLRFL CLLASPEGVE RMREAHPDVP
IVTAALDERL DEHGYIVPGL GDAGDRMFGT K
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