| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2215 |
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| Symbol | |
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| ID | 4579191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 2214481 |
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| End bp | 2215506 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639769545 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_916003 |
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| Protein GI | 119384947 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.550248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.919804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAA TCCTCATCAC CATTCCCGAA GGTCTGTCCG AGCGCCTTGA TAAGGCGCTT
GCCCTTGCCG CGCCAGAGCA GGCGGCGCTA TCGCGCTCGC GCCTGGCCAA GTTGATCGCC
GAGGGCGCAG TCCTCGGCCC CTCGGGGCCG GTGACGGACG GCAAGGTGCG GGCCGAGACC
GGCGACTACC GGGTGCGGAT CGTTGCGCCC GAGCCGCTGG AGGCGCAGCC CGAGCCGATC
CCCTTGGCCG TCGCCTATGA GGACGCGGAG CTGATCGTGG TGGACAAGCC CGCCGGCATG
GTGGTGCATC CCGCGCCGGG CGCGCCCTCG GGGACGCTGG TCAACGCGCT GCTGGCGCAT
TGCGCGGGCA GCCTGTCGGG CATCGGTGGC GCGGCGCGGC CCGGCATCGT GCATCGCATC
GACAAGGAAA CCTCGGGCCT TCTGGTGGTG GCAAAGACCG ACCGCGCCCA TCAGGGGCTG
GCGCGGCAAT TCGCCGACCA CACGGCACGG CGGCGCTATC TGGCCATCGC GCATGGCATG
ATCGACCCGG CCGATGCCCG GCTGCGGGGC CTGCCGGGCG TGGGATTCGA GCCGGGCGGC
GTGCTGCGCA TCGCCACGCT GATCGGCCGC CACCCCGGCG ACCGGCAGCG CCAGGCCGTC
AGCTTCCAGA ACGGCCGCCA TGCCGTGACC CGCGCCCGGG TGGTCGAGAC CTTCGGCACG
CCCCCCGCGG CCATGCTGGT CGAATGCCGG CTGGAAACCG GACGCACGCA TCAAATCCGC
GTGCATATGG CCCATGCGGG ATTGGGGCTG GTCGGCGACC CGGTCTATGG TGGCAACAGG
CGGGCCTCGG CCAGGGCGTT GGGGGCGGAT GCCGCCGCGG CCGTCGCCGC CTTTCCCCGC
CAGGCGCTGC ACGCCGCCGA GCTGGGCTTC GAACATCCGG TCAGCGGCCA GACGCTGACC
TTTGCCAGCC CGCTGCCGGC CGACATGGCC GGATTGCTGG CGACACTGCG CAAGGCGGCG
GACTGA
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| Protein sequence | MAEILITIPE GLSERLDKAL ALAAPEQAAL SRSRLAKLIA EGAVLGPSGP VTDGKVRAET
GDYRVRIVAP EPLEAQPEPI PLAVAYEDAE LIVVDKPAGM VVHPAPGAPS GTLVNALLAH
CAGSLSGIGG AARPGIVHRI DKETSGLLVV AKTDRAHQGL ARQFADHTAR RRYLAIAHGM
IDPADARLRG LPGVGFEPGG VLRIATLIGR HPGDRQRQAV SFQNGRHAVT RARVVETFGT
PPAAMLVECR LETGRTHQIR VHMAHAGLGL VGDPVYGGNR RASARALGAD AAAAVAAFPR
QALHAAELGF EHPVSGQTLT FASPLPADMA GLLATLRKAA D
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