Gene Pden_2202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2202 
Symbol 
ID4579178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2205509 
End bp2206006 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content69% 
IMG OID639769532 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_915990 
Protein GI119384934 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.594029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAG CCACCGGAAA ACCCGTCGGG ATCATCATGG GCAGCCAGTC CGACTGGCCG 
ACCATGCGCG AGGCCGCGGC CATCCTGGAC GAGCTGCGCA TCGGTTACGA GGCGCGGATC
GTTTCCGCCC ATCGCACGCC GGACCGGCTG TGGGACTATG GCAAGACGGC GGTGGCGCGG
GGGCTGAAGG TCATCATCGC CGGTGCCGGC GGCGCCGCGC ATCTGCCGGG CATGATGGCC
AGCAAGACCC GGGTGCCGGT GATCGGCGTG CCGGTGCAGA CCAAGGCGCT GTCGGGCGTT
GATTCGCTTT ATTCCATCCT GCAGATGCCC AAGGGCTATC CGGTCGCCAC CATGGCCATC
GGCGCGGCGG GTGCCGCCAA TGCCGGGCTG ATGGCGGCGG GGATCCTGGC GATCTCGGAC
CCCGAACTGG CCGCGCGGCT GGACGCCTGG CGGCAGGCGC TCAGCGATTC CATCCCCGAG
GAGCCGAAGG ATGAGTGA
 
Protein sequence
MEKATGKPVG IIMGSQSDWP TMREAAAILD ELRIGYEARI VSAHRTPDRL WDYGKTAVAR 
GLKVIIAGAG GAAHLPGMMA SKTRVPVIGV PVQTKALSGV DSLYSILQMP KGYPVATMAI
GAAGAANAGL MAAGILAISD PELAARLDAW RQALSDSIPE EPKDE