Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2185 |
Symbol | |
ID | 4579161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 2187551 |
End bp | 2188333 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639769515 |
Product | glycoside hydrolase family protein |
Protein accession | YP_915973 |
Protein GI | 119384917 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.765174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTCC TGGGCAAGAT TATGGCGGTG CTGGCGCTGG TTGTGCTGGC CTCGTGCGGG GGGCCCTCCA GCGGGCCGGC AGTGATGGCG GGGCAGGGCC GCGGCCCGCA ATTCGGCGAC AGCGCGCCGC ATCCGTGGGT GGGCGGGCAT CCCTATGACC ATCCGGTGCA TGGCATCGAC ATCTCGCGCT GGCAGGGCGA CATCGACTGG AACCGCGTGC GCAGCTCGGG CATCAGCTTC GCCTTCATCA AGGCGACCGA GGGCGGCGAC CATTCCGACC CGAACTTCCG CCGCTACTGG CGCGAGGCGG CGCAGGCCCG CATTCCGCGC GGCGCCTATC ACTACTTCTA CTTCTGCCGC TCGGGTTCGG AGCAGGCGGC CTGGTTCATC GCCAACGTGC CCCGGGAACG CGGTGCGATG CCGCCGGTCC TGGACCTGGA ATGGACAGCC TCCAAGACCT GCCCGCATCG TCCGCCAAGC CATGAGGTGC TGCGCGAGGC CAAGATATTC AAGGACATCC TGCACCGGCA TTACGGCCAG CGCCCGATCA TCTACACCAC GGTGGACTTC TATCGCGACA ACAACCTGGG TTCCTGGCCC GAGGAGTTCT GGCTGCGCTC GGTCGCCGGC CATCCGCGCA TCGTCTATCC CGGCCAGCGC TACAGCTTCT GGCAATATAC CGGCACCGGC ATCGTTCCCG GGATCAAGGG CAACGTGGAC CTGAACGTCT TTGCCGGCTC GCCGGCGCAG TGGCGGGTAT GGCTGAACCA GCGCCTACAG TAA
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Protein sequence | MTFLGKIMAV LALVVLASCG GPSSGPAVMA GQGRGPQFGD SAPHPWVGGH PYDHPVHGID ISRWQGDIDW NRVRSSGISF AFIKATEGGD HSDPNFRRYW REAAQARIPR GAYHYFYFCR SGSEQAAWFI ANVPRERGAM PPVLDLEWTA SKTCPHRPPS HEVLREAKIF KDILHRHYGQ RPIIYTTVDF YRDNNLGSWP EEFWLRSVAG HPRIVYPGQR YSFWQYTGTG IVPGIKGNVD LNVFAGSPAQ WRVWLNQRLQ
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