| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2185 |
|---|
| Symbol | |
|---|
| ID | 4579161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 2187551 |
|---|
| End bp | 2188333 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639769515 |
|---|
| Product | glycoside hydrolase family protein |
|---|
| Protein accession | YP_915973 |
|---|
| Protein GI | 119384917 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.765174 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATTCC TGGGCAAGAT TATGGCGGTG CTGGCGCTGG TTGTGCTGGC CTCGTGCGGG
GGGCCCTCCA GCGGGCCGGC AGTGATGGCG GGGCAGGGCC GCGGCCCGCA ATTCGGCGAC
AGCGCGCCGC ATCCGTGGGT GGGCGGGCAT CCCTATGACC ATCCGGTGCA TGGCATCGAC
ATCTCGCGCT GGCAGGGCGA CATCGACTGG AACCGCGTGC GCAGCTCGGG CATCAGCTTC
GCCTTCATCA AGGCGACCGA GGGCGGCGAC CATTCCGACC CGAACTTCCG CCGCTACTGG
CGCGAGGCGG CGCAGGCCCG CATTCCGCGC GGCGCCTATC ACTACTTCTA CTTCTGCCGC
TCGGGTTCGG AGCAGGCGGC CTGGTTCATC GCCAACGTGC CCCGGGAACG CGGTGCGATG
CCGCCGGTCC TGGACCTGGA ATGGACAGCC TCCAAGACCT GCCCGCATCG TCCGCCAAGC
CATGAGGTGC TGCGCGAGGC CAAGATATTC AAGGACATCC TGCACCGGCA TTACGGCCAG
CGCCCGATCA TCTACACCAC GGTGGACTTC TATCGCGACA ACAACCTGGG TTCCTGGCCC
GAGGAGTTCT GGCTGCGCTC GGTCGCCGGC CATCCGCGCA TCGTCTATCC CGGCCAGCGC
TACAGCTTCT GGCAATATAC CGGCACCGGC ATCGTTCCCG GGATCAAGGG CAACGTGGAC
CTGAACGTCT TTGCCGGCTC GCCGGCGCAG TGGCGGGTAT GGCTGAACCA GCGCCTACAG
TAA
|
|---|
| Protein sequence | MTFLGKIMAV LALVVLASCG GPSSGPAVMA GQGRGPQFGD SAPHPWVGGH PYDHPVHGID
ISRWQGDIDW NRVRSSGISF AFIKATEGGD HSDPNFRRYW REAAQARIPR GAYHYFYFCR
SGSEQAAWFI ANVPRERGAM PPVLDLEWTA SKTCPHRPPS HEVLREAKIF KDILHRHYGQ
RPIIYTTVDF YRDNNLGSWP EEFWLRSVAG HPRIVYPGQR YSFWQYTGTG IVPGIKGNVD
LNVFAGSPAQ WRVWLNQRLQ
|
|---|
| |