| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2183 |
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| Symbol | aspS |
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| ID | 4579159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2185083 |
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| End bp | 2186858 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639769513 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_915971 |
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| Protein GI | 119384915 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.403701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCT ATCGCAGCCA TACCTGCGGC GAACTGACCG CCGCTGCCGC CGGGTCCGAA
ATCCGCCTGT CCGGTTGGGT CCACCGGGTC CGGGACCATG GCGGGGTGCT GTTCATCGAC
CTGCGCGACC ATTACGGCAT CACCCAGGTG ATCGCCGACA GCGACTCGCT CGCCTTCGCG
GCGCTGGAAA AGCTGCGTGC CGAGACGGTG ATCCGCATCG ACGGCCGGGT CAAGCTGCGC
GACCCGAGCC TGGTCAATCC CAAGCTGCCC ACCGGCGAGA TCGAGGTCTA TGCCACCGCG
ATGGAGGTTC TGGGCGCCGC GGACGACCTG CCGCTGCCGG TCTTCGGCGA CCAGGACTAT
CCCGAGGAGA CGCGGCTGAC CTATCGCTTC CTCGACCTGC GCCGCGAAAG CCTGCACAAC
AACATCATGC TGCGCTCGCG CGTGGTGAAA TGGCTGCGCG ATGCGATGTG GGACCAGGGC
TTCACCGAGT TCCAGACCCC GATCATCACC GCCAGCTCGC CCGAAGGGGC GCGCGACTTC
CTGGTGCCCT CGCGCCTGCA TCCGGGCAAG TTCTATGCCC TGCCGCAGGC GCCGCAGCAG
TTCAAGCAGC TGATCATGGT CGCGGGCTTC GACAAGTATT TCCAGATCGC GCCCTGCTTC
CGCGACGAGG ACCCGCGCGC CGACCGCTCG CCCACCGATT TCTACCAGCT TGACCTGGAG
ATGTCCTTCG TCGAGCAGGA GGATGTGTTC CGCGCCATTC AGCCGGTAAT CCAGGGGCTG
TTCGAGGAAT TCGGCGGCGG TCGCCGGGTC GATACGGACT GGCCGCGCAT CCCCTATGCC
GAGGCGATGC TGAAATACGG CTCGGACAAG CCCGATCTGC GCAACCCCAT CGAAATGCAG
GTGGTTTCGG ATCATTTCCG CGGCTCGGGC TTCGCGATCT TCGCAAAATT GCTGGAGCAG
GACGGCACCG AGGTCCGCGC CATCCCGGCG CCGGGCGGCG GCTCGCGCAA GTTCGCCGAC
CGCATGAACG CCTTCGCGCA AGGCCAGGGC CTGCCCGGCA TGGGCTATAT CTTCTGGCGC
AAGGCCGAGG ATGGCACGAC CGAGGCCGCC GGTCCCATCG CCAAGGCGCT TGGCCCCGAA
AAGACCGAGG CGATCCGCAC CCAGCTTGGC CTGGGCGAAG GGGACGCAGC CTTCTTCCTG
GGCGGCAAGC CCGAGACATT CGAAGCCGTC GCCGGCCGCG CCCGCAACGA GATCGGCCGC
GAGCTTGGCC TGATCGACGA GAACCAGTTC AAATTCGCCT GGATCGTCGA TTTCCCGATG
TATGAGAAGG GCGAGGACGG CCGGATCGAC TTCAGCCACA ACCCCTTCTC GATGCCGCAG
GGCGGACTCG ATGCGCTAGA GGGCGATCCG CTGGCGGTCA TGGGCTATCA ATACGACTTG
GCCTGCAACG GCTACGAGCT GGTTTCGGGC GCGATCCGAA ACCACCGCCC CGAAATCATG
TTCCGCGCCT TCGAATTGGC CGGCTATGGC CGGGACGAGG TGGAAAAGCG GTTCGGCGGC
ATGGTCAAGG CGTTCCGCTA TGGCGCGCCC CCGCATGGCG GCTGTGCGGC GGGCATCGAC
CGCATCGTCA TGCTGCTGGC CGACGAGGTG AATATCCGCG AGGTCATCAT GTTCCCGATG
AACCAGCGCG CCGAGGACCT GATGATGGGC GCCCCCAGCG AGCCGACCAA CGAGCAGCTG
CGCGAATTGC GCCTGCGCGT TCTGCCGCGC GAGTGA
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| Protein sequence | MSAYRSHTCG ELTAAAAGSE IRLSGWVHRV RDHGGVLFID LRDHYGITQV IADSDSLAFA
ALEKLRAETV IRIDGRVKLR DPSLVNPKLP TGEIEVYATA MEVLGAADDL PLPVFGDQDY
PEETRLTYRF LDLRRESLHN NIMLRSRVVK WLRDAMWDQG FTEFQTPIIT ASSPEGARDF
LVPSRLHPGK FYALPQAPQQ FKQLIMVAGF DKYFQIAPCF RDEDPRADRS PTDFYQLDLE
MSFVEQEDVF RAIQPVIQGL FEEFGGGRRV DTDWPRIPYA EAMLKYGSDK PDLRNPIEMQ
VVSDHFRGSG FAIFAKLLEQ DGTEVRAIPA PGGGSRKFAD RMNAFAQGQG LPGMGYIFWR
KAEDGTTEAA GPIAKALGPE KTEAIRTQLG LGEGDAAFFL GGKPETFEAV AGRARNEIGR
ELGLIDENQF KFAWIVDFPM YEKGEDGRID FSHNPFSMPQ GGLDALEGDP LAVMGYQYDL
ACNGYELVSG AIRNHRPEIM FRAFELAGYG RDEVEKRFGG MVKAFRYGAP PHGGCAAGID
RIVMLLADEV NIREVIMFPM NQRAEDLMMG APSEPTNEQL RELRLRVLPR E
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