Gene Pden_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2176 
Symbol 
ID4579152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2179445 
End bp2180137 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content69% 
IMG OID639769506 
Producthypothetical protein 
Protein accessionYP_915964 
Protein GI119384908 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2981] Uncharacterized protein involved in cysteine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCTAC GCGCGGTGAT CCTCGCTTGG GGAGACCTGC TGCGGCCGCG TATCTTCGGC 
GTGGTCGCGC TTGGCGTGGC GCTGACGCTG GTGCTGTTCG TGGCGCTGCA AGCCGGCGCC
TTCTGGGCGA TCCGCGCCTT TGCGCCCGAG ACGCTGACCC TGCCCTGGAT CGGCCCCGTG
CCGCTGGCAC CCGCGCTGTC CTGGAGCTCG CTGCTGCTCT TTCCGCTGAT GAGCATCTTC
CTGATGATCC CGGTCGCGGC CAGCTTTTCG GGACTGTTCG CCGAGCGCGT CTCGGATGCG
GTCGAAGAGG TGCACTATCC CGCCCGCAAG GGCCTGCCGG TCGATTTCTG GGACGGGCTC
TGGGAATCGC TGGCCGTGAT GGGCGCGGTC ATCCTGGTGA CGCTGGTGCT GACGCCCTTC
CTGGGCCCGC TGGCCTCGGT GCTGTTCTAT GGCGGCAACG GCTGGCTTCT GGGGCGCGAG
TTCTTCCAGA TGGCGGCCCG GCGCCACCTG CACGAACCGC AGGCGACCGC GCTGCGCCGC
AGCCTGACGA CGCAAGCCAC GGCGCTGGGG GTGCTGATCG CGCTGCTGCT GACCGTGCCG
GTGCTGAACG TGGTCATTCC GGTGCTGGCG GCGGCGGGGT TCACCCACCT TTTCCATATC
AGCGCGTCCA GGCCTCAAGG TCTGCGCGGG TGA
 
Protein sequence
MVLRAVILAW GDLLRPRIFG VVALGVALTL VLFVALQAGA FWAIRAFAPE TLTLPWIGPV 
PLAPALSWSS LLLFPLMSIF LMIPVAASFS GLFAERVSDA VEEVHYPARK GLPVDFWDGL
WESLAVMGAV ILVTLVLTPF LGPLASVLFY GGNGWLLGRE FFQMAARRHL HEPQATALRR
SLTTQATALG VLIALLLTVP VLNVVIPVLA AAGFTHLFHI SASRPQGLRG