| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2175 |
|---|
| Symbol | |
|---|
| ID | 4579151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 2178879 |
|---|
| End bp | 2179445 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639769505 |
|---|
| Product | nitroreductase |
|---|
| Protein accession | YP_915963 |
|---|
| Protein GI | 119384907 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACATG CCGATCCCGC CACCCTTGCC TTCCTGCGCC GCCGCCGCTC GCATCCGCCG
AAGCTGCTGA CCGGCCCCGC CCCCTCGCGC GAGGCGCTGG CGGACCTGCT GGAACTGGCC
GCCCGCGTGC CCGACCATGG CAAGCTGGAG CCCTGGCGCT TCGTGGTGCT GGGGCGCGAT
GCGCTGGACC GGCTGGCCCC GGTGCTGGCC GAGCATGTCC TGGCCAGGAG CGGGGACGAG
GCCGCGGCGG AAAAAGCGCG CTCGGCCTTT GGCTCGCCGG TGATCGTGGC GGTGGTCTCG
GCCCCCGTCG CAAGCCCGAA GGTGCCGGAA TGGGAACAGT TCCTGTCGGC CGGGGCGGTC
TGTCTGGAAC TGGTGAACGC GGCGCTGGCG GCAGGCTATG GCGCGGCCTG GCTGACCGGC
CCCGCGGCCG AGCCGGAATT CGCCCGCCCG CATCTGGGCA TCGGCGAGGG CGAGCGCATC
GTGGGGTTGG TCCATATTGG CCAGCGCGGC CCGACCCCGC CCGAGCGTCC GCGGCCGGAT
GTTGCGGCCA AGACCACCTT CCTGTGA
|
|---|
| Protein sequence | MEHADPATLA FLRRRRSHPP KLLTGPAPSR EALADLLELA ARVPDHGKLE PWRFVVLGRD
ALDRLAPVLA EHVLARSGDE AAAEKARSAF GSPVIVAVVS APVASPKVPE WEQFLSAGAV
CLELVNAALA AGYGAAWLTG PAAEPEFARP HLGIGEGERI VGLVHIGQRG PTPPERPRPD
VAAKTTFL
|
|---|
| |