| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2169 |
|---|
| Symbol | |
|---|
| ID | 4579986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 2174500 |
|---|
| End bp | 2176227 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639769499 |
|---|
| Product | acetolactate synthase 3 catalytic subunit |
|---|
| Protein accession | YP_915957 |
|---|
| Protein GI | 119384901 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.649258 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTATCG AAGCTCTGCG CGATCAGGGC GTCGATACGG TATTCGGCTA TCCGGGCGGG
GCGGTACTTC CCATTTATGA CGAGATTTTC CAGCAGAACG ACATCCGGCA CATCCTGGTG
CGCCACGAAC AGGGCGCCGT CCACATGGCC GAGGGCTATG CCCGCTCGAC CGGCAAGCCG
GGGGTCGTCC TGGTCACCTC GGGACCTGGC GCGACCAATG CCGTCACCGG GCTGACCGAT
GCGCTGATGG ATTCGATCCC CATCGTCGTG CTGACCGGGC AGGTTCCGAC CTTCCTGATC
GGCACCGACG GCTTCCAGGA GGCCGATACC ATCGGCATCA CCCGCCCCTG CACCAAGCAT
AACTGGCTGG TGAAAGAGAC GGACGAGCTG GCGGCGACGA TCCACAAGGC CTTCCACATC
GCCACCTCGG GTCGTCCGGG GCCGGTGCTG ATCGACATCC CGAAGGACGT GCAATTCGCC
ACCGGCGAAT ATGTCGGGCC GAAACAGATC GAGACGCCCA GCTACCAGCC GGTGAAGAAA
GGCGACCTGG CGACCATCAC CCGGCTGGTC GAGCTGATGG AAACCGCCAA GCGGCCGATC
TTCTATACCG GCGGCGGGGT GATCAATTCC GGCCCCGGCG CCAGCCAGCT TCTGCGCGAA
CTGGCCGAGG CGACGGGATT CCCGGTCACA TCGACGCTGA TGGGGCTGGG CGCCTATCCG
GCCTCGGGGT CGAAATGGAT CGGCATGCTG GGCATGCATG GCCTTTACGA GGCCAACATG
GCCATGCACG ACTGCGACCT GATGATCGCG GTCGGCGCGC GCTTCGACGA CCGCATCACC
GGGCGGGTCG CGGATTTCAG CCCCGGCTCG GTCAAGGCGC AGATCGACAT CGACCCCAGC
TCGATCAACA AGGTGATCCA TGTCGACCTG CCCATCGTCG GCGATGTCGG CCATGTGCTG
GAGGACATGC TGAAGGTCTG GAAATCCCGC GGCCGCAAGA CCGATACCGA GGGACTGCGG
GCATGGTGGG CGCAGATCGA ACAGTGGAAG GCGCGCAACT GCCTCGCCTA TCGCAACTCG
GACAAGGTCA TCAAGCCGCA GCATGCCTTG CAGCGGCTGC AGGCGCTGAC CGCGGGGCGC
AGCCCCTATT TCACCACCGA GGTCGGCCAG CACCAGATGT GGGCGGCGCA GTTCCTGCAT
TTCGAGGATC CGAACCACTG GATGACCTCG GGCGGACTGG GCACGATGGG CTATGGCCTG
CCCGCCTCGA TCGGGGTGCA GGTCGCCCAT CCCGAGGCGC TGGTCATCAA CGTCGCCGGC
GAGGCGTCCT GGCTGATGAA CATGCAGGAA ATGGCGACGG CGGTGCAGTT CCGCGCGCCG
GTCAAGCAGT TCATCCTGAA CAACGAACGC CTGGGCATGG TGCGGCAATG GCAGCAATTG
CTGCATGGCG AGCGCTATAG CCAGAGCTGG TCGGAAAGCC TGCCCGATTT CGTGAAGCTG
GCCGAAGCCT TCGGCTGCGG CGGGCGCACG GTTTCGGACC CGGCCGATCT GGACGCCGCG
ATCCAGGAGA TGATCGACTA TGACGGTCCG TTCATCCTGG ACGTGCTGGT CGAGAAGCAC
GAGAACTGCT TCCCGATGAT CCCCTCGGGC AAGCCGCATA ACGAGATGCT GCTGGGCGAG
GCCTCGACCG AAGGCGCCAT CACCGGCGCC GGCGCGGCCT TGGTCTGA
|
|---|
| Protein sequence | MVIEALRDQG VDTVFGYPGG AVLPIYDEIF QQNDIRHILV RHEQGAVHMA EGYARSTGKP
GVVLVTSGPG ATNAVTGLTD ALMDSIPIVV LTGQVPTFLI GTDGFQEADT IGITRPCTKH
NWLVKETDEL AATIHKAFHI ATSGRPGPVL IDIPKDVQFA TGEYVGPKQI ETPSYQPVKK
GDLATITRLV ELMETAKRPI FYTGGGVINS GPGASQLLRE LAEATGFPVT STLMGLGAYP
ASGSKWIGML GMHGLYEANM AMHDCDLMIA VGARFDDRIT GRVADFSPGS VKAQIDIDPS
SINKVIHVDL PIVGDVGHVL EDMLKVWKSR GRKTDTEGLR AWWAQIEQWK ARNCLAYRNS
DKVIKPQHAL QRLQALTAGR SPYFTTEVGQ HQMWAAQFLH FEDPNHWMTS GGLGTMGYGL
PASIGVQVAH PEALVINVAG EASWLMNMQE MATAVQFRAP VKQFILNNER LGMVRQWQQL
LHGERYSQSW SESLPDFVKL AEAFGCGGRT VSDPADLDAA IQEMIDYDGP FILDVLVEKH
ENCFPMIPSG KPHNEMLLGE ASTEGAITGA GAALV
|
|---|
| |