Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2166 |
Symbol | |
ID | 4579983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 2168202 |
End bp | 2170298 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639769496 |
Product | general secretion pathway protein E |
Protein accession | YP_915954 |
Protein GI | 119384898 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCA TCGTCCCTAT CAGGCCCTTC GAAGGCATAC CTGTCCTGGC GGCCCTGCCG GACCCCGCCG AGACGGTCGT GTCGGCCCGC GACCTGCGGC CGCTCGGCCA GATCCTGATC GAGGACGGCG CAGTCGACCC GCGCAACCTG TTCAAGGCGC TGGTCATGCG CCAGCGCCAG TCGGCACGGC TGGGCGAGAT CCTGCTGGCG AACGGCTGGG TGCGGGAAGA GGCGCTGATC CGCGCCCTGT CCCGGCAATG GCGCGCCAGC GTGCTGGACC TGAAGGCGCT GCCGCCCGAT CCGCGCCTGG TCGATGCGAT GGGGGCGCAG CTTTGCCTGG CCGAGGGGGC GGTGCCCTGG CGGCGCGTCG GCGGCGTGAC CTTCATCGCC ACCGCCCGGC CAGAAGGATT CCAGGCGTTG CAGGACCGCC TGCCCCAGGA TTTCGGCGCG GTGCGCATGT TGCTGTGTTC GGAAAACGCC GCGCGCGAGG CGATCCTGGC CCTGCGCCGC ACCGCGCTGA TCCGCCAGGC TGAAACCCGC GTTCCCGCCC ATGAAAGCTG CCGCACCCGC AACGAGCGCC GCTTCGGCCG AATCGCAGTG ATCCTGATCG CGGCAACGGT GCTGGGGTTG CTGCTGGCAC CGATCGCGGT GATCGCCTTG CTGACGGGTT GGACGGTGCT GACGCTGATC GCCTCGGCCG CGTTGAAGCT GCTCTCCTTT GCCGCCATCC TGCGCCGACA CCGCCGGGAC CGCACCAAGG CCGAGGCCAT GGCGCGCGAT GCGATCCCGC CGCCCGAGAT GACGGCACCG CTGCCGGTGA TCTCGGTCAT GGTGCCGCTG TTCGCCGAGG CCGATATCGC CGAAAAGCTG ATCGGCCGGC TGTCGCGGCT GGACTACCCG CGCGAGTTGA TGGACATCCT GATCGTGGTC GAGGAAACCG ACAGCGTCAC CTGCGCGGCG CTGGAGGACG CCCGTCTGCC CCGCTGGCTG CGGGTCGTGA AGGTGCCGGA CGGGCCGGTG CGCACCAAGC CGCGGGCACT GAACTATGCG CTGAACTTCT GCCGCGGCTC GATCATCGGG GTCTGGGATG CCGAGGACCG GCCCGAGCCC GGCCAGTTGC TCAAGGTCGC ACGCGGCTTT CATTTCGCGC CGCCCGAGGT GGTCTGCCTG CAAGGCGTGC TGGACTATTA CAACCCGCGC ACCAACTGGC TGGCGCGCGC CTTTACCATC GAATACGCCT CGTGGTTCCG TGGCACGCTG GCCGGGGCGG CGGCGCTGGA TCTGGTGGTG CCGCTGGGGG GAACCACGCT GTTCTTCCGC CGCGAGGCAC TGGAAGAGGT CGGCGCCTGG GACGCCTGGA ACGTTACCGA GGATGCCGAC CTGGGCGTGC GCCTGACCCG GCGCGGCTAT CGCACGCGGA TGCTGGACAC CGTAACGCAT GAAGAAGCGA ATTGCCGCCT GATCCCCTGG GTCAAGCAGC GGTCGCGCTG GCTCAAGGGC TTTGCCATGA CCTGGGGTGT GCATATGCGC GACCCGGTGG CGCTGTGGCG CGATCTGGGC GCACGGCGCT TCATCGGCTT GCAGGTGCAG CTTTTCGCCT CGGTCTCGCA ATACCTGCTG GCGCCGGTAC TGTGGAGCTT TTGGCTGCTC AGCCTCGGCC TGCCGCATCC GATGCGCGGG ATGCTGTCGG GCATGCTGGG CGGCAATGCC ATCGCCATCC TGTTCACGCT GTTCGTGGCC TCGGAACTGC TGAACATCGC CATCGGGCTT TGGGCGGTGC GCGGGCGGGG GCATCGCCAC CTGCTGCCCT GGGTGCCGAC GCTGCACCTG TATTTCCCGC TCGGCTGCCT GGCGGCCTGG AAGGCGATCT ACGAGGTGGT GGCCAAGCCC TTCTACTGGG ACAAGACGCA GCACGGCATC TTCGAGGCCG GCCAGGAAGA GGCGCCCGAG CCCGCACCCA TCGCGCCGGG CAGGCTGATC CCGCTGCGCA AGGTGGCCGA TCTGCACCCC TTGGCGCTGA TTGCCGACCC GGCCATGCCT GCTCCGCGCT CGAAGCGCAA CTGGGCTTTC CTGCGCGGCA AACGCCTGAC CGCATGA
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Protein sequence | MARIVPIRPF EGIPVLAALP DPAETVVSAR DLRPLGQILI EDGAVDPRNL FKALVMRQRQ SARLGEILLA NGWVREEALI RALSRQWRAS VLDLKALPPD PRLVDAMGAQ LCLAEGAVPW RRVGGVTFIA TARPEGFQAL QDRLPQDFGA VRMLLCSENA AREAILALRR TALIRQAETR VPAHESCRTR NERRFGRIAV ILIAATVLGL LLAPIAVIAL LTGWTVLTLI ASAALKLLSF AAILRRHRRD RTKAEAMARD AIPPPEMTAP LPVISVMVPL FAEADIAEKL IGRLSRLDYP RELMDILIVV EETDSVTCAA LEDARLPRWL RVVKVPDGPV RTKPRALNYA LNFCRGSIIG VWDAEDRPEP GQLLKVARGF HFAPPEVVCL QGVLDYYNPR TNWLARAFTI EYASWFRGTL AGAAALDLVV PLGGTTLFFR REALEEVGAW DAWNVTEDAD LGVRLTRRGY RTRMLDTVTH EEANCRLIPW VKQRSRWLKG FAMTWGVHMR DPVALWRDLG ARRFIGLQVQ LFASVSQYLL APVLWSFWLL SLGLPHPMRG MLSGMLGGNA IAILFTLFVA SELLNIAIGL WAVRGRGHRH LLPWVPTLHL YFPLGCLAAW KAIYEVVAKP FYWDKTQHGI FEAGQEEAPE PAPIAPGRLI PLRKVADLHP LALIADPAMP APRSKRNWAF LRGKRLTA
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