Gene Pden_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2163 
Symbol 
ID4579980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2165092 
End bp2166129 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content67% 
IMG OID639769493 
Productalcohol dehydrogenase 
Protein accessionYP_915951 
Protein GI119384895 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAC TGGTGCTGGA AGAAAAGGGC AAGCTGTCGC TGCGGGATTT CGACATTCCC 
GGCACGCTCG GCCCCAGGGA CGTACGGATC AAGACCCATA CGGTGGGGAT CTGCGGTTCG
GACGTGCATT ACTATACGCA TGGGAAGATC GGCCATTTCG TCGTCGAAGC GCCGATGGTG
CTGGGCCATG AGGCCGCGGG CACGGTAATC GAGGTGGGGG CCGAGGTTTC GCACCTGAGG
CCCGGCGACC GGGTCTGCAT GGAGCCGGGG GTTCCCGACC CGACCTCGCG CGCCGCCAAG
CTGGGCATCT ACAATGTCGA TCCCGCCGTG ACCTTCTGGG CGACGCCGCC GGTGCATGGC
TGCCTGACGC CCGAGGTGAT CCATCCGGCC GCCTTCACCT ACAAGCTGCC CGACAATGTC
AGCTTCGCCG AGGGCGCGAT GGTCGAGCCC TTTGCCATCG GCATGCAGGC GGCGCTGCGG
GCGCGCATCC AGCCGGGCGA CGTGGCGGTG GTGACGGGCG CGGGCCCCAT CGGCATGATG
GTGGCGCTGG CCGCACTGGC CGGCGGTTGC GCGCGGGTGA TCGTGGCCGA CCTTGCCCAG
CCCAAGCTGG ACATCATCGG CGCCTATGAC GGCGTCGAGA CGGTGAACAT CCGCAACCGC
CCGCTGGCCG AGGCGGTGTC CGGGGCGACC GGGGGCTGGG GCGCCGACAT CGTCTTCGAA
TGCTCGGGCG CCGCGCCCGC GATCCTGTCC ATGCACCAGC TTGCGCGTCC GGGCGGCGCC
ATCGTGCTGG TCGGCATGCC GGTCGATCCG GTGCCGGTCG ATATCGTCGG GCTGCAGGCC
AAGGAACTGC GGGTCGAGAC GGTGTTCCGC TATGCCAATG TCTATGATCG TGCCATCGCG
CTGATCGCCT CGGGCAAGGT GGATCTCAAG CCGCTGATCT CGGCCTCGAT CCCCTTCGAG
GAGAGCATCG CCGGTTTCGA CCGTGCCGCC CTAGCGCGCG AGACCGACGT GAAATTGCAG
ATCGTCATGC CGGAGTAA
 
Protein sequence
MKALVLEEKG KLSLRDFDIP GTLGPRDVRI KTHTVGICGS DVHYYTHGKI GHFVVEAPMV 
LGHEAAGTVI EVGAEVSHLR PGDRVCMEPG VPDPTSRAAK LGIYNVDPAV TFWATPPVHG
CLTPEVIHPA AFTYKLPDNV SFAEGAMVEP FAIGMQAALR ARIQPGDVAV VTGAGPIGMM
VALAALAGGC ARVIVADLAQ PKLDIIGAYD GVETVNIRNR PLAEAVSGAT GGWGADIVFE
CSGAAPAILS MHQLARPGGA IVLVGMPVDP VPVDIVGLQA KELRVETVFR YANVYDRAIA
LIASGKVDLK PLISASIPFE ESIAGFDRAA LARETDVKLQ IVMPE