Gene Pden_2157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2157 
Symbol 
ID4579974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2158182 
End bp2158913 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content65% 
IMG OID639769487 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_915945 
Protein GI119384889 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.300132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAT CGCTGGACGG CAAGATCGCC GTCATCACCG GCGCGGCCTC GGGGATCGGC 
CTTGCCGCCA CCCGGCGGCT GCTGGATCGC GGTGCCACCG TGGTCATGGT GGACTGGAAC
GAGGCGGCGC TGGCCGAACT GGCCGGCAAG CTGGGCGACA GGGCGATCCC GCAGGTGACG
AACCTGCTCG ACGTCGACAG CTGCAATGCG ATGATCCCCG AGATCCTGGC CAAGGTCGAC
CATATCGACA TCCTCTATTG CAATGCCGGC ACCTATATCG GCGGCGAGTT GACCGAGACG
ACGCCCGAGG CCATCGACCG GATGCTGAAC CTCAACGTCA ACGCGGTGAT GAAGAACGTC
CGCGCCGTGG TGCCGCACAT GACCCGGCGG AAAACCGGCG ACATCGTCGT CACCTGCTCG
ATCGCCGGCC ATTTCCCGAC CTGGTGGGAG CCGGTCTATT CCGGCTCGAA ATGGGCGATC
ACCAGCTTTG TCCAGGGCAT GCGCCGGCAG ATGATCCCGC ATGGCGTGCG CGTCATGCAG
GTCTCGCCCG GCCCGGTGGT CTCGGCGCTG CTGGCCGACT GGCCCGAGGA GAATTTGCGC
AAGGCCAGGG AATCCGGCAG CCTGATCGAC GCGGAAGAGG TTGCCGATGC GCTCGAATAC
ATGCTGACCC GCAAGCGCAC CGTCACCATC CGCGACATGC TGGTGTTGCC GACCAATTTC
GACCGCGTCT GA
 
Protein sequence
MSESLDGKIA VITGAASGIG LAATRRLLDR GATVVMVDWN EAALAELAGK LGDRAIPQVT 
NLLDVDSCNA MIPEILAKVD HIDILYCNAG TYIGGELTET TPEAIDRMLN LNVNAVMKNV
RAVVPHMTRR KTGDIVVTCS IAGHFPTWWE PVYSGSKWAI TSFVQGMRRQ MIPHGVRVMQ
VSPGPVVSAL LADWPEENLR KARESGSLID AEEVADALEY MLTRKRTVTI RDMLVLPTNF
DRV