Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2157 |
Symbol | |
ID | 4579974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 2158182 |
End bp | 2158913 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639769487 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_915945 |
Protein GI | 119384889 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.300132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGAAT CGCTGGACGG CAAGATCGCC GTCATCACCG GCGCGGCCTC GGGGATCGGC CTTGCCGCCA CCCGGCGGCT GCTGGATCGC GGTGCCACCG TGGTCATGGT GGACTGGAAC GAGGCGGCGC TGGCCGAACT GGCCGGCAAG CTGGGCGACA GGGCGATCCC GCAGGTGACG AACCTGCTCG ACGTCGACAG CTGCAATGCG ATGATCCCCG AGATCCTGGC CAAGGTCGAC CATATCGACA TCCTCTATTG CAATGCCGGC ACCTATATCG GCGGCGAGTT GACCGAGACG ACGCCCGAGG CCATCGACCG GATGCTGAAC CTCAACGTCA ACGCGGTGAT GAAGAACGTC CGCGCCGTGG TGCCGCACAT GACCCGGCGG AAAACCGGCG ACATCGTCGT CACCTGCTCG ATCGCCGGCC ATTTCCCGAC CTGGTGGGAG CCGGTCTATT CCGGCTCGAA ATGGGCGATC ACCAGCTTTG TCCAGGGCAT GCGCCGGCAG ATGATCCCGC ATGGCGTGCG CGTCATGCAG GTCTCGCCCG GCCCGGTGGT CTCGGCGCTG CTGGCCGACT GGCCCGAGGA GAATTTGCGC AAGGCCAGGG AATCCGGCAG CCTGATCGAC GCGGAAGAGG TTGCCGATGC GCTCGAATAC ATGCTGACCC GCAAGCGCAC CGTCACCATC CGCGACATGC TGGTGTTGCC GACCAATTTC GACCGCGTCT GA
|
Protein sequence | MSESLDGKIA VITGAASGIG LAATRRLLDR GATVVMVDWN EAALAELAGK LGDRAIPQVT NLLDVDSCNA MIPEILAKVD HIDILYCNAG TYIGGELTET TPEAIDRMLN LNVNAVMKNV RAVVPHMTRR KTGDIVVTCS IAGHFPTWWE PVYSGSKWAI TSFVQGMRRQ MIPHGVRVMQ VSPGPVVSAL LADWPEENLR KARESGSLID AEEVADALEY MLTRKRTVTI RDMLVLPTNF DRV
|
| |