| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2153 |
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| Symbol | |
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| ID | 4579970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 2153814 |
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| End bp | 2154917 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639769483 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_915941 |
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| Protein GI | 119384885 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.200708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.986613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGCAG ACCCCGGCAA CGACGCTTTC GTTGTCTTCG ATCATGTCCA GAAAAGCTAT
GACGGCCAGA CACTTGTCGT CAAAGACCTG AACCTGACCA TCGGCAAGGG CGAATTTCTG
ACCATGCTTG GCCCGTCCGG CTCGGGCAAG ACCACCTGCC TGATGATGCT GGCGGGGTTC
GAGACGGCGA CCCATGGAGA GATCCGGCTG GACGGCCGCA ACATCAACGA CGTGCCGCCC
CACCGGCGCG GCATCGGCAT GGTGTTCCAG AACTATGCGC TGTTCCCGCA TATGAGCGTG
GGCGAGAACC TGTCCTTTCC GCTGGAAGTG CGCGGCATGG GCAAGGACGA GCGCGAGACG
CGCGTCACCC GCGCGCTCGA CATGGTGCAG ATGGGCCAGT TCAAGAATCG CCGCCCGGCC
CAGCTTTCGG GCGGCCAGCA GCAGCGTATC GCGCTGGCGC GCGCGCTGGT CTTCGACCCC
AAGCTGGTGC TGATGGACGA GCCGCTGGGC GCGCTCGACA AGCAGCTGCG CGAGCATATG
CAGTTCGAGA TCAAGGCGCT GCACGACCGG CTGGGCATCA CCGTGGTCTA TGTGACCCAC
GACCAGGGCG AGGCGCTGAC CATGTCGGAC CGAATCGCCG TGTTCAACGA CGGCCGCATC
CAGCAGCTTG CGCCGCCGCC GGTGCTCTAT GAGCAGCCCG AGAACAGCTT CGTCGCCGGC
TTCATCGGAG AGAACAATGC GCTGCGCGGC ACCATCGAGC AGCTTCAGGG CGACAAGACG
CTGGTGCGGC TGGGCAATGG CGAGCTGATC GACGCCACCG CCGTCAACAT CCGCGAAGTC
GGGCAGGTCA CCACGGTCTC GATCCGGCCC GAGCGGGTCG AGTTCAAGCC CGAGCTGATG
CCGGCCGGCG CCCATACCAT CGAGGCGCAG GTGCGCGACG TGATCTATAT GGGCGACATC
CTGCGGGCGC GGCTGCATGT CGCCGGCCAG GACGATTTCG TCATGAAATA CCGCAATACG
CTTGGCCAGG TGAAGCTGTC GCCCGGCCAG ACGATACGGA TCGGCTGGCA TCCCGAGGAC
GCCCGCGCCC TCGATCCGGT CTGA
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| Protein sequence | MTADPGNDAF VVFDHVQKSY DGQTLVVKDL NLTIGKGEFL TMLGPSGSGK TTCLMMLAGF
ETATHGEIRL DGRNINDVPP HRRGIGMVFQ NYALFPHMSV GENLSFPLEV RGMGKDERET
RVTRALDMVQ MGQFKNRRPA QLSGGQQQRI ALARALVFDP KLVLMDEPLG ALDKQLREHM
QFEIKALHDR LGITVVYVTH DQGEALTMSD RIAVFNDGRI QQLAPPPVLY EQPENSFVAG
FIGENNALRG TIEQLQGDKT LVRLGNGELI DATAVNIREV GQVTTVSIRP ERVEFKPELM
PAGAHTIEAQ VRDVIYMGDI LRARLHVAGQ DDFVMKYRNT LGQVKLSPGQ TIRIGWHPED
ARALDPV
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