Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2139 |
Symbol | |
ID | 4579956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 2140366 |
End bp | 2141157 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639769469 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_915927 |
Protein GI | 119384871 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.248459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATTC TCGACCGCAT CAAGGCCTAC AAGCTTCAGG AAATCGCCGC CGCCAAGGCC GCCCGGCCGC TGGCCGGCAT CGAGGCCGCG GCCCGCGAAG CATCGCCCCC CCGCGGCTTT GCCGCCGCGC TGACCGACAA GGCCGCGCAG GGCCATGCGC TGATCGCCGA GATCAAGAAG GCCAGCCCCT CCAAAGGGTT GATCCGCCCG GATTTCGACC CGCCGGCACT GGCCCGCGCC TATCAGGCGG GTGGCGCCGC CTGCCTTTCG GTGCTGACCG ACGGCCCCAG CTTTCAGGGC GCGCCGGAAT TCCTGACCGC CGCGCGCGAT GCCTGCGACC TGCCGGCGCT GCGCAAGGAT TTCCTCTACG ATCCGTATCA GGTGGCCGAG GCCCGCGCCT GGGGCGCCGA TTGCATTCTG ATCATCATGG CCTCTGTCGA TGACACGCTT GCCGCCGAGC TGGAGGACGC GGCCCTGCAT TGGGGCATGG ATGCGCTGGT CGAGGTTCAC GACCGCGAGG AACTGGACCG CGCCTTGCGG CTGAAATCGC CGCTGATCGG GGTGAACAAC CGCAATCTCA AGACCTTCGA GGTCAGCCTG GACACCACGC TGGACCTGGC GCCGCATGTG CCGGCCGAGC GCGATCTGGT CTGCGAGAGC GGGCTGTTCA CGCCTTCCGA CCTGAACCGC ATGGCCGAGG CGGGGGTCAG GCGCTTCCTG ATCGGCGAAA GCCTGATGCG CCAGCAGGAC GTGACCGCCG CCACCCGCAG CATCCTGGGC CTCGCGGCAT GA
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Protein sequence | MDILDRIKAY KLQEIAAAKA ARPLAGIEAA AREASPPRGF AAALTDKAAQ GHALIAEIKK ASPSKGLIRP DFDPPALARA YQAGGAACLS VLTDGPSFQG APEFLTAARD ACDLPALRKD FLYDPYQVAE ARAWGADCIL IIMASVDDTL AAELEDAALH WGMDALVEVH DREELDRALR LKSPLIGVNN RNLKTFEVSL DTTLDLAPHV PAERDLVCES GLFTPSDLNR MAEAGVRRFL IGESLMRQQD VTAATRSILG LAA
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