Gene Pden_2134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2134 
Symbol 
ID4579951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2136018 
End bp2137193 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content71% 
IMG OID639769464 
Producthypothetical protein 
Protein accessionYP_915922 
Protein GI119384866 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.452249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCGC TCAATCCCGC CCTTGCCGCG ACCTTCCGCC CGCCGGTGAT GGAGGCGCGG 
CGTTGGCTCG CCGGGCTGTC CTTCCCGCCC GAGCGCCCGC TGATCAATCT CAGCCAGGCC
GCGCCGGTCG AGCCGCCGCC CGACCCCCTG CGCCGCGCCA TGGCCGAGGC GGCGCTGGAA
CGGCCCGACG CGCATCTCTA CGGCCCCGTC CTTGGCCGCC CCGAACTGCG CGAGGCCGTG
GCCGGCGAAT GGTCGCGCGC CTATGCCGGT GCCATCCGCC CCGAAGAGGT CGCGATCACC
CAGGGCTGCA ACCAGGCATT CTGCGCCGCG ATCCAGACGC TGGCCGCCGC GGGGGACGAG
GTGATCCTGC CGACGCCCTG GTATTTCAAT CACAAGATGT GGCTCGACAT GCAGGGCATC
CGCGCCGTGC CCCTGCGTTG CGGCCCGGAC ATGGTGCCGG ACCCGGCCGA GGCCGAAAGG
CTGATCACCG CCCGCACCAG CGCCATCGTG CTGGTCAGTC CGAACAACCC CTCGGGGGCG
GAATATCCGG GCGAAACCTT GCGCGGCTTT TTCGATCTGG CGCGGTCGCG CGGGCTGGCG
CTGATCCTGG ACGAGACCTA TCGCGACTTC GATGCGCGCG AGGGTGCGCC GCACGACCTG
TTCGCCGATC CCGACTGGGG CGATGTGCTG ATCCATCTCT ACAGCTTCTC GAAAGCCTAT
CGCCTGACCG GGCATCGCGT GGGCGCGGTT ATCGCCAGTC CGGCCCACAT GGTCGAGATC
GAGAAGTTCC TCGATACCGT CGCGATCTGT GCCGGCCAGA TCGGCCAGAT CGGCGCGGCC
TGGGGTATGG CGAACCTGCG CGACTGGCTG GCGGGCGAGC GGGCCGAGAT CCTTGCCCGC
CGGGCGGCCA TGGCCGAGGG CATGGCGGCG CTGCCGGGCT GGCGCGTCAA GGGCTGCGGT
GCCTATTTCG CCTGGGCCGA GCACCCGTTC GACATGCCCT CGTCGGAACT GGCGCAGCGC
CTGCTGCGCG AGGCGGGGGT GCTGCTGCTG CCCGGCACCA TGTTCATGCC CGAGGGCGAC
GCCGAGGGCG CGCGCCATGT CCGCATCGCC TTTGCCAATG CCGACCGGGA CGGCATCGCC
GCGCTGATGC GCCGGCTGGA GGCGTTCCGG CCCTGA
 
Protein sequence
MLPLNPALAA TFRPPVMEAR RWLAGLSFPP ERPLINLSQA APVEPPPDPL RRAMAEAALE 
RPDAHLYGPV LGRPELREAV AGEWSRAYAG AIRPEEVAIT QGCNQAFCAA IQTLAAAGDE
VILPTPWYFN HKMWLDMQGI RAVPLRCGPD MVPDPAEAER LITARTSAIV LVSPNNPSGA
EYPGETLRGF FDLARSRGLA LILDETYRDF DAREGAPHDL FADPDWGDVL IHLYSFSKAY
RLTGHRVGAV IASPAHMVEI EKFLDTVAIC AGQIGQIGAA WGMANLRDWL AGERAEILAR
RAAMAEGMAA LPGWRVKGCG AYFAWAEHPF DMPSSELAQR LLREAGVLLL PGTMFMPEGD
AEGARHVRIA FANADRDGIA ALMRRLEAFR P