Gene Pden_2133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2133 
Symbol 
ID4579950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2133934 
End bp2135892 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content70% 
IMG OID639769463 
Productputative peptidyl-prolyl cis-trans isomerse 
Protein accessionYP_915921 
Protein GI119384865 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.981825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGGCA AGGGCAAATC GACCATCGTC TGGTTGCTGA TGGGCATGCT GGTTCTGGGG 
CTTGGCGGCT TCGGCGTCAC CAACTTCTCG GGCGGCACGG CGGATATCGG CAGCGTGGGT
GGTGTCGAGA TCTCGGCCCA GGACTATGCC CGCACCCTGC GCGCCGAGAT GCAGGAGTTT
TCCGCCCGCA CCGGCCGGCA GATCAGCGCC GCCGAAGCCA AGACCATCGG CGTCGACCAG
GCGGCGCTGG CGCGGCTTTA CACCGCCGCC GCGCTCGAGG CCGAGGCGAA CCGGCTGGGC
GTCTCGGTCG GCGACCAGGC GGTGGCCGGA CAGATCACCG GCATCGCCGC CTTTCGCGGG
CTGAACGGCC AGTTCGACCG CGCCATCTAT GCCGATGCGC TGCGCCGCGA GGGCATGCGC
GAGGCCGAGT TCGAGCATGA CCTGCGCATG GACATGGCCC GGCTGATCCT GCAGGACGCG
GCGCTGGCCG GGGTCAGCGC GCCCCAGCCG GTGGTGGCGC AGACCCAGGG CTGGCTGTTG
GAGACGCGCG ACATCCACTG GCGCGAACTG ACCGCCGAGG ACCTGCCCAC GCCGGTCGCC
ACCCCGGACG AGACGACGCT GCAAGCCTGG CACAAGGCCA ATGCCGACCG TTTCACTGCG
CCCGAGATCC GCCAGATCAC CTATGTCTGG CTGACCCCCG AGATGCTGGA GGGCGAGGTC
GAGGTCGACG AACAGGCGCT GCGCGATCTC TATCAGGACC GGATCGAGGA ATTCCAGCAG
CCCGAGCGCC GCATGGTCGA GCGCCTGGTC TTTCCGACCA TGGCCGCCGC CGAGGAGGCC
AAGGCGCGCA TCGACAGCGG CGAGGTCACC TTCGAGCAAC TCGCCGCCGA GCGCGGGCTG
AGCCTGGCCG ACATTGACCT GGGCGAGGTC GCCCGGGCCG ATCTGGGCTC CGCCGGCGAG
GCAGTCTTTG CGCTGGAGGA GCCCGGCGTC GCCGGCCCGG CCAGTTCCGA CCTGGGGCCG
GCGCTGTTCT CGATGAATGC GATCCTTGAG CCTCTGGACA TTCCCTTCGA GCAGGCCCGG
GACGACCTGC GGCTCGAGGC CGCGGTCGAT CGCGCCCGCC GCCAGATCGA GGAACGCGCG
GGCGAGTTCG CCGACCTGCT GGCCGGCGGC GCCGCCCTGG AGGACATGGC GCAGGACACG
CCGATGAAAC TGGGCCGGAT CGACTGGAGC CAGGGCGCCG AGGCCGATCC GAACGGCATC
GACGCCTATC CCGAATTCCG CGAGCGCGCG GCGCAGCTGA CCGAAAAGGA CTTTCCCGAG
CTGTTCGAGA CCGAGGATGG CGGCGTCTTC GCGATGCGGC TGGACAAGAT CGAGCCGCCG
GCGCTGATCC CCTTCGAGGA CGTGCGCGAC CGCGTGGCCG AAGACTGGTC GCGCAACGAG
GGGCATCGCC TGCTGCTTGC TCTGGCCGAG GAATTGCGCG TGCAGGCCGA GGCGGCCGCC
GAGCCCGAGA TCGAGCCGGC CCCGGCGGCG GCGACCGCGC CGGCCTCCCA GGCCCTGGGC
GCGGCCGCGA CCGGCGCTGC AAACGCGACC GGCGGCAACG CGCCGGCAAC GGCCCGGCCC
GCCCCCGATC TGGGCACGCC CGCCACCAAC CTGCACCGGG GCGGCTTCAT CAACGGCGTG
CCGCAGGATG TGGTGGTCCA GGCATTCGAG ATCGCCGAGG AAGGCGCGAC CGAGGTGGTC
GATGCCGAGA ACCGGGTCTT CCTGATCACC CTGGACAAGA TCCATCCCGC CGATACCGCG
GGCGACGAGG CCGCGCAGAT CCGCGACGGC ATCTCGGCCC GGCTGGCGGA TTCGCTGCGC
CAGGACGTTT TCGACTATTT CGCACGCGCC CTTCAGGTGC AGGGCGGCGT GACGCTGAAC
CAGACCGCCG TGGATGCGGT AAACGCACAG GTTCAGTAA
 
Protein sequence
MRGKGKSTIV WLLMGMLVLG LGGFGVTNFS GGTADIGSVG GVEISAQDYA RTLRAEMQEF 
SARTGRQISA AEAKTIGVDQ AALARLYTAA ALEAEANRLG VSVGDQAVAG QITGIAAFRG
LNGQFDRAIY ADALRREGMR EAEFEHDLRM DMARLILQDA ALAGVSAPQP VVAQTQGWLL
ETRDIHWREL TAEDLPTPVA TPDETTLQAW HKANADRFTA PEIRQITYVW LTPEMLEGEV
EVDEQALRDL YQDRIEEFQQ PERRMVERLV FPTMAAAEEA KARIDSGEVT FEQLAAERGL
SLADIDLGEV ARADLGSAGE AVFALEEPGV AGPASSDLGP ALFSMNAILE PLDIPFEQAR
DDLRLEAAVD RARRQIEERA GEFADLLAGG AALEDMAQDT PMKLGRIDWS QGAEADPNGI
DAYPEFRERA AQLTEKDFPE LFETEDGGVF AMRLDKIEPP ALIPFEDVRD RVAEDWSRNE
GHRLLLALAE ELRVQAEAAA EPEIEPAPAA ATAPASQALG AAATGAANAT GGNAPATARP
APDLGTPATN LHRGGFINGV PQDVVVQAFE IAEEGATEVV DAENRVFLIT LDKIHPADTA
GDEAAQIRDG ISARLADSLR QDVFDYFARA LQVQGGVTLN QTAVDAVNAQ VQ