| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2126 |
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| Symbol | |
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| ID | 4579923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 2127145 |
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| End bp | 2129103 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639769456 |
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| Product | capsule polysaccharide export protein-like |
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| Protein accession | YP_915914 |
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| Protein GI | 119384858 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3524] Capsule polysaccharide export protein |
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| TIGRFAM ID | [TIGR01010] polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACCC CCACCACACC GCCCGGCAGC AAGGCCGGCC AGCCGGCCCA GCAGCCGGCC
GCCAGGCAGC AAGGCCCCGC TGCCGCCGCT GCACCGGCGA CGCAGGCGGA TGCCGCCGCA
CAAGCCAAGC CGCAAGCCGC GACCGGGGCA CCCAAGCCCG GCCCGGCGCG ACAGCCCTCC
CCCCCGGCCG ATCCGAAACC CGCCGATCCG AAGCCGGCCG CACCCCAGGC TGCCGCGCCC
AAGCCGGCCG CGCCCCAGGA CGCATCCCCG GCCCGCGCGC AGCGCCCCTT CCAGGGCCAG
CAGGGCCTGG GCGCAAAGCC GCAGGACGCC CAGCCGCAAC CGGAAAGGCC GCAGCCCCAG
AAGCCGCAGC CCCAGAAACC GCAGCCCGAG AAGACCCAGC CGGGACCGGC AGCATCGAAG
CCGGCAGCAG CGCAGCCGCC GCAGCAGAAG CCGCCGGCGC AGCCCCGGCA GGATCAGGCG
CGGGATCAGA CGCAGGACCG CAAGCCGGCC CCGCCGCCGC AAAAGCCCGC GAGCCCGGCC
AGCCCGCAAT CGGGCCCGCA ATCGGGCCAG CAATCGGGCC CGCAATCGGG CCAGCAATCG
GGCCAGCAAT CGGGCCAGCA ATCGGGCCAG GCGGCGCGTG CGGCCCAGCC GGCGGCCCCG
GCCGATCCCA AGCCGCCGGC GCTGCGCCAG CAGGACCAGC CGATCCCGGT CCGGCCCATG
GCGCAACCCG CCGCGAAGCC GGCCCCGAAA CCTGCCGCGA AGCCCGCCGC AAAGCCTCTG
GCCCGGGTCC GGCCCCAGCA GCCGGCCGCC GCCCCCGACC AGCCGGTGCG CCCGACCGTC
GGCATCGCCG AGCCGCGCCG CCGGCACTGG CTGATCCTGG GCTCGTTCCT GGCGCTGGTG
CTGCTGCCCA GCCTGCTCTG GGCCGCCTAT CTCTGGCTGC GCGCCGAGGA CCAGTATGTC
TCGACCGTCG GCTTCTCGGT GCGCAAGGAA CAGTCCACCC CCTCGATCGA CCTGCTGGGC
GGGCTGGCGC CGCTGGCCGG CGGCGCCAGC GCCTCGGACA CCGACATCCT CTACGAATAC
ATCCGCAGCC AGGACATGGT CGAAAGGATC GACGCCCGGC TCGACCTGCG CGCGCGCTTC
TCGGGGCCTT GGCCGCATGA CTTCGTCTTC GCCTTCGACC CCGAGGGCCA TGTCGAGGAC
CTGACCGACT ACTGGCAGCG CCAGGTCAAG GTGCTCTACG ACAGCACCAC CCAGCTGATC
ACGCTGAAGA TCAGCGCCTT CACCGCCCGG GACGCGCAGG AGATCGCCGC GGCGGTGTTC
CAGGAAAGCT CGGACAAGAT CAACCAGCTC TCGACCATCG CCCAGGACGA CGCCACCCGG
CTGGCCAAGG CCGAGCTGGA CAAGGCCCGC GCCGAGCTGA CCGAGACCCG CCAGGCGATG
ACCGCCTTCC GCATGCGCTC GCAGATCGTC GATCCCGAGG CGGACCTGGC CGGGCAGATG
GGGGTGCTGA GCGGGCTGCA GGCGCAGCTG GCCGAGGTGC TGGTCGCCCA CGACCTGCTT
CTGGACAACG CCCAGCCCAC CGACCACCGC GTCACCCAGT CGCAGCAGAA GATCGACGCC
CTGCGCCGGC TGATCGACGC CGAGCGCGCC AAGTTCGGCG CCGAGGGCAA GGGACCGGCG
GGCGAGAGCT ATGCCCAGCT GATGGCCGAA TACGAAAAGC TGGCCGTGGA CCGCGAATTC
GCCGAGGGCG CCTATCGCTC GGCCCGCATC GCCCATGAGA CGGCGCTGGC CGAGGCACAG
CGCCAGGCGC GCTACCTGGC CGCCCATATC GAGCCCAAGG TGGCGCAAAG CGCGACCGAG
CCGAACCGGC CCTGGCTCTG GGCGATGATC ACCGGCATGC TGCTGGCGGG CTGGTCGATC
CTGGTGCTGA TCTATTACAG CGTCCGCGAC CGCCGCTAG
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| Protein sequence | MTTPTTPPGS KAGQPAQQPA ARQQGPAAAA APATQADAAA QAKPQAATGA PKPGPARQPS
PPADPKPADP KPAAPQAAAP KPAAPQDASP ARAQRPFQGQ QGLGAKPQDA QPQPERPQPQ
KPQPQKPQPE KTQPGPAASK PAAAQPPQQK PPAQPRQDQA RDQTQDRKPA PPPQKPASPA
SPQSGPQSGQ QSGPQSGQQS GQQSGQQSGQ AARAAQPAAP ADPKPPALRQ QDQPIPVRPM
AQPAAKPAPK PAAKPAAKPL ARVRPQQPAA APDQPVRPTV GIAEPRRRHW LILGSFLALV
LLPSLLWAAY LWLRAEDQYV STVGFSVRKE QSTPSIDLLG GLAPLAGGAS ASDTDILYEY
IRSQDMVERI DARLDLRARF SGPWPHDFVF AFDPEGHVED LTDYWQRQVK VLYDSTTQLI
TLKISAFTAR DAQEIAAAVF QESSDKINQL STIAQDDATR LAKAELDKAR AELTETRQAM
TAFRMRSQIV DPEADLAGQM GVLSGLQAQL AEVLVAHDLL LDNAQPTDHR VTQSQQKIDA
LRRLIDAERA KFGAEGKGPA GESYAQLMAE YEKLAVDREF AEGAYRSARI AHETALAEAQ
RQARYLAAHI EPKVAQSATE PNRPWLWAMI TGMLLAGWSI LVLIYYSVRD RR
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