| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2124 |
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| Symbol | |
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| ID | 4579921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 2123332 |
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| End bp | 2126172 |
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| Gene Length | 2841 bp |
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| Protein Length | 946 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639769454 |
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| Product | hemolysin-type calcium-binding region |
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| Protein accession | YP_915912 |
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| Protein GI | 119384856 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAGC CCAGCCATCT GGGCACGGTC ACGGTCGGCG GCGTGACCTA TCTGGTCGTC
GCGGCATCGC AAAGCTCGTC GCTGACCACC ATGCGGCTGA CCTATGAGGG CGAGCTGCTG
CCGGTCGATC ACGTCATCGA CGAACGCAGC ACCCGCTTTG CCGGCGCCAC CGCGCTGGAA
ACCGTCACCA TGGACGGCCG CGCCTTCGTC TTCGTGGGCG GCGGCGACGA CGGCATCAGC
GTCTTTACCG TGCTACCCGA GGGCCGGCTG ATGCATCTGG CCACGCTTGC CGATGCGCAT
GATCGGGCGC TGGCCGATGT CTCCGCCCTC TCGGCGCTGG TGATCGACGG CAGGATCGCG
CTTTTCGTCT CGTCCCGCAC GGAAAGCGGC ATCACGCAGT TCGTTTTCGA GCCCGGGCGG
ATCGGGCTGA CACGGGTCGT CGGCGCGGGC TGGCAATCCG GCACCGGGGG CAACGACATG
ATGATGGCCA GCGCCGGGAC GCGTGGGCTG GACGGCGGCG CGGGCGACGA CATCCTGATC
GCCGGCGGCA GCCCTGTGCA GATGACCGGC GGCGCCGGCG CGGACACCTT CGTGCCGATG
GAGGTCAACG GCAAGATCAC CATCACCGAT TTCGAGCCGG GCGTGGACCG GCTGGACCTG
TCCTTCCTGG GCATGATCCG CAATGTCGGG CAGCTGGGGT TCAGGCCGGA AAGCTATGGA
ATCAGGATAT TTTACGGAAA TTCGGTTATC TGGGTCATGA CACGCGACAA CACGATGCTC
CAGGCGAGCG CCTTCGACAA TTCCCTTTTC CCCATCGCCC ATTACGCACC GCCCGACATG
CGCACGACGG TGACCGGCAC CCCGCGCAAC GACACGCTGA GGGCCGGCCG CAACGGCTCG
GACGTCTTTG GCCAGGCCGG CCACGACCTG CTGCTGGGCG GGCTGGGCGA GGACAGGCTT
TATGGCGCGC TTGGCAACGA CACGCTGGAG GGGCGCGACA GCAACGATCA GCTTTACGGC
GGCGACGGCA ACGACCGGCT GTTCGGCGGC AAGGGGAACG ACCTGCTCAA TGGCGGCAAC
GGCAACGATT ATCTCGTCGG CGGCGCAGGC GCCGATACGC TGCGGGGCGG TGCCGGAAAC
GACACCCTGG CCGGCGGCGA CGGAAACGAC CTGCTGTTCG GAGGCGCGGG GAATGACAGC
CTGACCAGCG GAGCGGGTGC CGACACGCTT TATGGCGAAG GTGGCGACGA TACCCTGGCC
GGATACGCCG GCAATGACCG TCTTTACGGT GGCGCGGGCA ACGACCTGCT GCTCGGCGGC
GCGGGCCATG ACAGCCTCGT CGGCGGCGCG GGCAACGATA CGTTGCGCGG CGAGGCCGGA
AACGACACCC TGGCCGGCGG CGACGGAAAC GACCTGCTGT TCGGAGGCAC GGGGAATGAC
AGCCTCACCG GCGGCGCGGG GGCCGATACG CTTTATGGCG ACGGCGGCAA CGACACGCTG
GCCGGGTATG CCGGCAACGA CCATCTCTTC GGTGGTGCGG GCAACGACCT GCTGCTCGGC
GGCACAGGCC ATGACAGTCT CGTCGGCGGC GCGGGCAACG ATACGCTGCG CGGCGAGGCC
GGAAATGACA CCCTCGCCGG CGGCGACGGA AACGACCTGT TGTTCGGAGG TGCGGGCCAT
GACAGCCTGA CCAGCGGCGC GGGCGACGAT ACGCTTTATG GCGACGGCGG CAACGACACG
CTGGCCGGAT ATGCCGGCAA CGACCGCGTG TTCGGCGGCG ACGGCAACGA CCTGCTGTTC
GGAGGCGCGG GCCATGACAG CCTCGTCGGC GGTGCGGGCT CCGATACGCT GCGGGGTGGC
GAAGGCAACG ACACGTTGGC CGGCGGCAAT GGCAACGACA CGCTCTGGGG CGAGGCGGGC
GACGATCTGC TGCAAGGCGA TGCGGGCGAC GATCTTTTGG AAGGCGGCCC AGGCAACGAC
ACCCTGCTGG GCGGCGAGGG ATACGATCGG CTGCGGGGCG GCGAGGGCAA CGATATGCTG
ATGGGCGGTC GCGGCCACGA CACGCTTTAC GGCGAATCGG GCGCGGACGT GCTGCATGGC
GACGAAGGGC ATGACCTGCT GTATGGCGGC GATGGCGGCG ACACGCTGTT CGGCGGGGCC
GACAACGACA CGCTGTATGG CCAGGCCGGC GATGATTCGC TTTCGGGCGG GCCGGGCAAC
GACGCCCTGT ATGGCGGCTT CGGCAACGAT ACCGTCCATG GCGGTGACGG CCACGACCTG
ATCGAGGGCG GGCCGGGCAA CGACATGCTT TACGGCGATG GCGGCAGCGA CACGCTTCTC
GGCGGTCTGG GCGACGACTT TCTGGACGGT GGCGACGGCA ATGATGAATT GCATGGCGGC
CTGGGCGGCG ACACCCTGTC CGGCGGCGCA GGCCATGACA GCCTGTTCGG CGATGCCGGC
GACGACCTGC TTGGCGGCGG TGACGGCCAT GACCTGATCG AGGGCGGCGA CGGCAACGAT
ACGCTGGTCG GCGGACGCGG CTGCGATACG CTGGTCGGCG GGCTCGGAGC CGATGTGTTC
GTCTTCTCCG CGCCCGAAGA CCTGGACGGC AGCACCGATG TCATCCTGGA TTTCACGTCC
GGCGAGGACA AGATCGACCT TTCTGGCCTT GGGCTGACCT CCATCGGCAC CGATGATTTC
TCATCGTCTG ACATTGTCAT CTCGGTTCTT GGCCCTGATT TTTTTGTTGT TTTTGTTGAC
CTTGACTCAG ACCGGCGCGC CGATCTCGTG CTGGAGGTCT CCGGGTCCGC GGGGCTTTTT
GCGTCGGATT TTCTGCTTTA G
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| Protein sequence | MDQPSHLGTV TVGGVTYLVV AASQSSSLTT MRLTYEGELL PVDHVIDERS TRFAGATALE
TVTMDGRAFV FVGGGDDGIS VFTVLPEGRL MHLATLADAH DRALADVSAL SALVIDGRIA
LFVSSRTESG ITQFVFEPGR IGLTRVVGAG WQSGTGGNDM MMASAGTRGL DGGAGDDILI
AGGSPVQMTG GAGADTFVPM EVNGKITITD FEPGVDRLDL SFLGMIRNVG QLGFRPESYG
IRIFYGNSVI WVMTRDNTML QASAFDNSLF PIAHYAPPDM RTTVTGTPRN DTLRAGRNGS
DVFGQAGHDL LLGGLGEDRL YGALGNDTLE GRDSNDQLYG GDGNDRLFGG KGNDLLNGGN
GNDYLVGGAG ADTLRGGAGN DTLAGGDGND LLFGGAGNDS LTSGAGADTL YGEGGDDTLA
GYAGNDRLYG GAGNDLLLGG AGHDSLVGGA GNDTLRGEAG NDTLAGGDGN DLLFGGTGND
SLTGGAGADT LYGDGGNDTL AGYAGNDHLF GGAGNDLLLG GTGHDSLVGG AGNDTLRGEA
GNDTLAGGDG NDLLFGGAGH DSLTSGAGDD TLYGDGGNDT LAGYAGNDRV FGGDGNDLLF
GGAGHDSLVG GAGSDTLRGG EGNDTLAGGN GNDTLWGEAG DDLLQGDAGD DLLEGGPGND
TLLGGEGYDR LRGGEGNDML MGGRGHDTLY GESGADVLHG DEGHDLLYGG DGGDTLFGGA
DNDTLYGQAG DDSLSGGPGN DALYGGFGND TVHGGDGHDL IEGGPGNDML YGDGGSDTLL
GGLGDDFLDG GDGNDELHGG LGGDTLSGGA GHDSLFGDAG DDLLGGGDGH DLIEGGDGND
TLVGGRGCDT LVGGLGADVF VFSAPEDLDG STDVILDFTS GEDKIDLSGL GLTSIGTDDF
SSSDIVISVL GPDFFVVFVD LDSDRRADLV LEVSGSAGLF ASDFLL
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