Gene Pden_2120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2120 
Symbol 
ID4579917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2120003 
End bp2120854 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content71% 
IMG OID639769450 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_915908 
Protein GI119384852 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGCC TGCTGGTCTT CGGTCGCAGC GGGCAGGTCG CGACCGAGCT TGCGCGGCTG 
GCGCCCGAAG CGCGCTTTCT GGGTCGGGAT CAGGCCGAGC TGACCGATGC GGCCGCCTGC
GCCGCGGCGA TTCGCGCATC GGGCTGCACG GCGGTGCTGA ACGCCGCCGC CTATACGGCC
GTGGACCGCG CCGAATCCGA ACCCGAGCTT GCCCACGCCA TCAATGCCGA TGCCCCCGCC
GCCATGGCGC GGACGGCGGC TGAGATCGGC GTGCCCTTCC TGCATATCTC GACCGACTAC
GTCTTTGACG GCTCGGGCGA GCGGCCCTGG TCCGAGACCG ATCCGACCGG CCCGCTGGGT
GTCTATGGCG CGACCAAGCT GGCCGGAGAG CGGGGCATTG CCGCGGCCGG CGGGCAATGG
GCGATCCTGC GCACGTCCTG GGTGTTCTCG GCCCATGGCG CGAATTTCCT CAAGACCATG
CTGCGGCTGG GCGCCGAGCG CGAGGAGTTG CGCGTCGTCG CCGACCAGCA GGGCGGCCCG
ACCCCGGCCG GCGACATCGC CGCCGCCTGT CTTGCCATGC TGGGGGCCAT GCGTGCCGAT
GCCGCGCGCG GCGGCATCTA TCATTTCGCG GGCGGCCCCG ACACCAGCTG GGCCGGTTTC
GCGCGCGAGA TCATGGCGCA GGCGGGGCTT TCCTGCCGCG TCACCGACAT TTCCACGGCG
GATTATCCCA CCCCCGCCCG GCGCCCGGTG AATTCACGCC TGAACTGCGC CGCCATATCG
CGGGATTTCG GCATCGGTCG CCCCGACTGG CGCGCCGGTC TCGCCAAGGT ATTGCAGGAG
CTGAAAACAT GA
 
Protein sequence
MKGLLVFGRS GQVATELARL APEARFLGRD QAELTDAAAC AAAIRASGCT AVLNAAAYTA 
VDRAESEPEL AHAINADAPA AMARTAAEIG VPFLHISTDY VFDGSGERPW SETDPTGPLG
VYGATKLAGE RGIAAAGGQW AILRTSWVFS AHGANFLKTM LRLGAEREEL RVVADQQGGP
TPAGDIAAAC LAMLGAMRAD AARGGIYHFA GGPDTSWAGF AREIMAQAGL SCRVTDISTA
DYPTPARRPV NSRLNCAAIS RDFGIGRPDW RAGLAKVLQE LKT