Gene Pden_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2103 
Symbol 
ID4579900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2106320 
End bp2106799 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content70% 
IMG OID639769433 
Productureidoglycolate hydrolase 
Protein accessionYP_915891 
Protein GI119384835 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG3194] Ureidoglycolate hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.287519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGA TCAAGGCAAG GCCGATCACG GCCGAGGAGT TCGCCCCCTT CGGCGAGTTG 
CTGTCCCCGC GCGAGGCGCC TTCGAAGATG ATCAATGCCG GGCGCTGCGA GCGGCATCAT
GCGCTGGCCA CGGTCGAGCG CGGCGGGGGC GAGGCGATCA TCTCGATCTT TCGCTCCGAG
CCGGTGAGCC TGCCCTATGA TTGCGCGCTG CTGGAGCGCC ATCCCCTGGG GTCGCAAGCC
TTCGTGCCGC TGGGGCCTGA TCCCTGGCTG TCGATCGTGG CGCCGGACGA GGGCGGCCGG
CCGGGCGCGC CGATCGCCTT TCTGGTGCCG GCGGGCATGG GGGTGAACCT GCGTGCCGGG
ATCTGGCATG GCGTGCTGAC GCCGCTGGAC CGCCCGGCCG ATTTCCTGGT CGTGGATCGC
GAGGGCGAGG GCGTGAACCT GGAAGAGGTC GAGATCGCCC CCGTCACCGT CGAGGCATGA
 
Protein sequence
MSRIKARPIT AEEFAPFGEL LSPREAPSKM INAGRCERHH ALATVERGGG EAIISIFRSE 
PVSLPYDCAL LERHPLGSQA FVPLGPDPWL SIVAPDEGGR PGAPIAFLVP AGMGVNLRAG
IWHGVLTPLD RPADFLVVDR EGEGVNLEEV EIAPVTVEA