| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2093 |
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| Symbol | |
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| ID | 4579890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 2096063 |
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| End bp | 2097922 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639769423 |
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| Product | 3-deoxy-D-manno-octulosonic-acid transferase-like |
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| Protein accession | YP_915881 |
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| Protein GI | 119384825 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.971887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.185697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCG CCCGCACCAA GACCCCAAGC CCCATGCCTA AGACACGTGC CGCATCGCCC
GGACGGCCTC GTCCCAGCCA GCGGCACATG GGCCGACGCG CAGGCAAGCG CCGTCAGATC
ACGGCCGCAA GCGCTCCGCA AAAAGGGCAG GAAGAGCGCA CCGGTTCGCC CTTCCCTGCC
ACCCCACGGA CCCTCACCAC CACGCTCGGG TCGTCGGGGG CTGCTCCCTC TGCCGGCATG
TCCTGCTTAC TCCGGCCCCC GGTTCACCGC AAATCGCAAC TGCGCGCGAT TTTACACAAA
TCAGCCTTGG TTCCCCTGCG AGCCTCGGCT AGGTTCGCGC CGCAATCCGA ACCCAGGAGA
ACACGATGGC GCAGCGCCTC CACCTCGTTT TCGGTGGTGA ACTTGTCGAT CCCACCCGGA
CCGAGTTCCG CGACACCAAG GACATCCACA TCGTCGGCAT CTTCCCGAAC TATGCCGAAG
CCCACGCCGC GTGGAAGGCC GAGGCGCAGC GCACCGTGGA CAGCGCCCAT ACCCGCTATT
TCATCGCCCA CCTGCATCGG CTGCGCGACG AGGAGCACGA GGTCAGCCCG ACCGAGGAAC
TGGGCAGCTA AGCCGCCGCG AATCGCGATG TCCCCCGCAG ATGCAACCGC ATCCCTGGCG
CTCTGGCTGC ATCTGCGCCG CCGCGCAGCG CTGGCCAGCG GACCGGTCGA GCCCGTCGAC
GCCCCGCAGG GCGAAGGGCC GCTGGTCATG CTGCATCTTT CGGAACAGGC CGACGAGCCG
GGACAGTCGG TCGCGCTGGT CAAGGCGCTC CTGGCAAGGC GGCCGGGCCT GCGCTTCGCC
TTTTCGGGCG CGACTTTGCC GCCCGAGGCC CTGCCCGCCG GACTGCGCGC CGTCACCCTG
CCCGACCTCG GGGACCCGGC CGCGGCGCGC GAGGTGATCC GGGCGCTGCA ACCGCGCGCG
CTGCTGGTGC TTGGCGACCG GCTTCCGGCC TCGCTGATCT CGGGCATGGC CGAACGGCGC
CTGCCGATCA TTCTGGGCGA GGCGCGGCTT GTGACCTATA CCCGGCGCGG CTCGTGGCGC
GGGGCGGTCA ATCGCGGATT GATAGGCAGG ATCACCCGCG TCCTTGCCCC GGACCCGACC
GCAGCGGCCG CCGCCCGGCA GCTGGGTGCC CCGCCCGACC GGATCGAGCT GACCGGGCCG
ATCACCGAGA CGCGCCCGCC GCTGGTCGCG AACGAGGCCG AACGGCGCGC GCTGGCCCAG
ATCCTGGCCG GCCGCCACAC CTGGCTCGCG GCTTGCCCCA CCCTGCCCGA GGCCCGGCTG
GCGCTGGCCG CCCATCAGGC GGCACTGCAC CACAATCACC GTGCGCTGCT GATCCTGGCC
GGCCTGCCGC CCGAGACGAT CCCCGGGATC CGCGCCGAGG TCGAGGCGCT TGGCCTTGCG
GCGGTGCTGC GTTCGGACGA CGAGGACCCC TCGCCGGACG ACCATGTGCT GATCGCCGAG
GATACGCATG AGATGGGGCT GTGGTATCGG CTGGCGCCGG TCTGCTTCAT GGGCGGCACC
CTGCTGTCCG GCCCCGGCCT CGCGCCGCGC CACCCGTTCG AGCCCGCCGC GCTCGGCTCG
GCCATCATCC ACGGCCCGAT CACCGAGGCG CATGGCCCGG AATGGGTGCA GCTGGACGGA
GCCTCGGCCG CGCGGCTGGT CGCGGACGCA GTCGGGCTGA CCCGGGCGGT CGAGGATCTT
TCGGCACCGG ACCAGGCGGC TATGCTGGCC GGGAACGCCT GGTCGGTCAG CACCGGCGGC
GCCGCCGTGC TGCGCCGCAT CGCCGAGATC GTCGTCGAGG CCATGGAGGA TACGCGATGA
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| Protein sequence | MPAARTKTPS PMPKTRAASP GRPRPSQRHM GRRAGKRRQI TAASAPQKGQ EERTGSPFPA
TPRTLTTTLG SSGAAPSAGM SCLLRPPVHR KSQLRAILHK SALVPLRASA RFAPQSEPRR
TRWRSASTSF SVVNLSIPPG PSSATPRTST SSASSRTMPK PTPRGRPRRS APWTAPIPAI
SSPTCIGCAT RSTRSARPRN WAAKPPRIAM SPADATASLA LWLHLRRRAA LASGPVEPVD
APQGEGPLVM LHLSEQADEP GQSVALVKAL LARRPGLRFA FSGATLPPEA LPAGLRAVTL
PDLGDPAAAR EVIRALQPRA LLVLGDRLPA SLISGMAERR LPIILGEARL VTYTRRGSWR
GAVNRGLIGR ITRVLAPDPT AAAAARQLGA PPDRIELTGP ITETRPPLVA NEAERRALAQ
ILAGRHTWLA ACPTLPEARL ALAAHQAALH HNHRALLILA GLPPETIPGI RAEVEALGLA
AVLRSDDEDP SPDDHVLIAE DTHEMGLWYR LAPVCFMGGT LLSGPGLAPR HPFEPAALGS
AIIHGPITEA HGPEWVQLDG ASAARLVADA VGLTRAVEDL SAPDQAAMLA GNAWSVSTGG
AAVLRRIAEI VVEAMEDTR
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