Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2060 |
Symbol | |
ID | 4578924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 2067123 |
End bp | 2067452 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639769390 |
Product | HNH endonuclease |
Protein accession | YP_915848 |
Protein GI | 119384792 |
COG category | [V] Defense mechanisms |
COG ID | [COG3183] Predicted restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000208549 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCCGAG TTCATGTTTC CCGAGAACGA AACAGTACAC TCGTGAAGAA AAAGAAAGCC GTCGCGCTGA GACAGCATGG CTGTCTTGCC TGTGAGGTCT GTGGTTTCGA TTTCTTGCAA ACCTACGGAG AGAGGGGCCG GGAATTTATC GAATGCCACC ACACCCTGCC AATTTCATCG CTCGGTGAAC ACGGCAAGAC GAACCTGAAG GACCTTGCCT TGGTCTGTTC CAACTGCCAC CGGATGATAC ATGCTCGACG ACCTTGGTGG TCAATTGACG ATGCTAAGGC CGCGCTGATC GGCGCCAACG GATCAAGAGC CCAAAGCTGA
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Protein sequence | MTRVHVSRER NSTLVKKKKA VALRQHGCLA CEVCGFDFLQ TYGERGREFI ECHHTLPISS LGEHGKTNLK DLALVCSNCH RMIHARRPWW SIDDAKAALI GANGSRAQS
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