Gene Pden_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2060 
Symbol 
ID4578924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2067123 
End bp2067452 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content54% 
IMG OID639769390 
ProductHNH endonuclease 
Protein accessionYP_915848 
Protein GI119384792 
COG category[V] Defense mechanisms 
COG ID[COG3183] Predicted restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000208549 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCGAG TTCATGTTTC CCGAGAACGA AACAGTACAC TCGTGAAGAA AAAGAAAGCC 
GTCGCGCTGA GACAGCATGG CTGTCTTGCC TGTGAGGTCT GTGGTTTCGA TTTCTTGCAA
ACCTACGGAG AGAGGGGCCG GGAATTTATC GAATGCCACC ACACCCTGCC AATTTCATCG
CTCGGTGAAC ACGGCAAGAC GAACCTGAAG GACCTTGCCT TGGTCTGTTC CAACTGCCAC
CGGATGATAC ATGCTCGACG ACCTTGGTGG TCAATTGACG ATGCTAAGGC CGCGCTGATC
GGCGCCAACG GATCAAGAGC CCAAAGCTGA
 
Protein sequence
MTRVHVSRER NSTLVKKKKA VALRQHGCLA CEVCGFDFLQ TYGERGREFI ECHHTLPISS 
LGEHGKTNLK DLALVCSNCH RMIHARRPWW SIDDAKAALI GANGSRAQS