Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2059 |
Symbol | |
ID | 4578923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 2066523 |
End bp | 2066894 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639769389 |
Product | IS5 family transposase OrfA |
Protein accession | YP_915847 |
Protein GI | 119384791 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000233096 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGACC TGTACTGGCT GACCGACGAG CAGATGGCCA AGCTTGCCCC TTTCTTCCCG AAGTCGCACG GCAAGCCACG CGTCGATGAC AAGCGTGTTC TAAGCGGGAT TATCTTCATC AATCGCAATG GTTTGCGCTG GCGAGATGCC CCCAGGGAGT ATGGGCCGCA CAAGACGCTC TACAGCCGGT GGAAGCGTTG GAGCGAGAAA GGCATTTTCG CCAGGATGAT GATCGGGCTG GCCGCCGACC ACGGCGAGGA AAAGACCGTG ATGATCGACG CGACCTATCT GAAAGCGCAC CGCACCGCGA CCAGCATGGC CGCGAAAAAG GGGGGCGTGG ACGCCTCGTC GGCCGGACCA AGGGCGGCAT GA
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Protein sequence | MSDLYWLTDE QMAKLAPFFP KSHGKPRVDD KRVLSGIIFI NRNGLRWRDA PREYGPHKTL YSRWKRWSEK GIFARMMIGL AADHGEEKTV MIDATYLKAH RTATSMAAKK GGVDASSAGP RAA
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