| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2056 |
|---|
| Symbol | |
|---|
| ID | 4578920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 2063766 |
|---|
| End bp | 2065175 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639769386 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_915844 |
|---|
| Protein GI | 119384788 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0826059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000278509 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAATG CCTTCGACAT GATGCCGGCG GGTAGTGGCA ACTTGTTCCG GGGAACGGCC
GCCGCCGCGA CAGGGGGCGC CAGTGAGTTC CGAGGCAATA CCACCGCCGG GAAATACGCT
GGGACCGTGG GCGAATTCGT TCCGTCCGCC ATGGTGATGC CCGGCGCTCC GCTGTCGAAT
GCCCTGCGAT ATGGCGTTGT TCCCGGCCTT GCGTCGGAAA CAGCAGGACA ACTTGCTGAG
GGGCTGCCAG GAGAGCAATT GGCGCGCGCC GCCGCAGGCA TGCTGGCTGC CCCCATGGCG
AACCTTGCAG AGCGCGGGGT AAGGCGGGCG ATTAGCCCTC ATGGCGGCGC AGATCAGGGC
CGCCTCGCTC TTGCGCGCGT TCTCGATGAT GCAGGCGTTC CTGTCTCGGC CGGCCAGCGC
GTCGGCAACG AGGCCCTGCG CCGCAAGGAA GGCATGACCA ATGCCGGGCA GGCGCTGAAC
GATACCCAGC GCGAGGCGCT GACGCGCGCG GCTCTCAGGA CCGCAGGGAC GGATGCCAGC
CGCGCTACGC CCGAGGTGCT GGCGGATACG GCGAGGCGGA TCGGATCGGT TTTCGATGAT
GTGGCGCGCG GCGTGGATGT GACCCCGGAG CCTGCCACGC TCAATGCCCT CGCCGCCGCG
AATGAAACCT ACAAGCAGCT TGCCCCGAAA TCATCCCAGG CGCCCATTAT CGGGGAGGTC
GTCAAGCGCA TGACGGGTGC GTTCAGGACG GGCCAGGCCA TCCCGGCCAG CACGGTCAAT
TCGTGGCGGT CAAGCCTGTC GAAGCTGACC ACCAGCAGCG ACGGCGCAAC CCGCTCCGCC
GCTATCGAGG CGCTGGGCGC GCTTGATGAT GCCCTTGCAT CGACCCTGAC CAGCATGGGG
CGCACCGATG ACGTGGCGCG TCTGGCGACA GCGCGCGAGC AATGGCGCAA TTTCCTGGCC
ATCCAGAAGG CAGCCACCGG AGCCGGCGAA AACGCTGCGG CTGGTATTCT GTCGCCTTCT
GCGCTCAGGA ATGCTGTCGT TCAGCAAGGG CGTTCATCCT ATGCCCAAGG CGCAAGGGGC
GAACTCGGCA ATCTCGCACG GGCGGGCGAA GGCATCCTAC GGCCTTTGCC GAACTCGGGA
ACGGCGCAAA ACATCCAGGC GATGGGGCTT CCCGGTCTGG GGTGGGCGTC CGCGGGCGCT
GGCCTCGGTT CTCTTGCAGG CGGTCCTACC GGCGGCGCTC TTGGGGCTGC TGCTGGGACA
GTCATGCCCG GCCTGCTGGG AATGGCACGA ATGTCGCGTC CGGCGCAGAA CTGGCTGGCT
AACCAGACGG TCGGCCGAGG CACCGATATA CTGCCCCGGA ATGCCCTGTC GCCGGTCCTG
GCGGCGCTCT TGGGGCTGAA AGAGGATTGA
|
|---|
| Protein sequence | MRNAFDMMPA GSGNLFRGTA AAATGGASEF RGNTTAGKYA GTVGEFVPSA MVMPGAPLSN
ALRYGVVPGL ASETAGQLAE GLPGEQLARA AAGMLAAPMA NLAERGVRRA ISPHGGADQG
RLALARVLDD AGVPVSAGQR VGNEALRRKE GMTNAGQALN DTQREALTRA ALRTAGTDAS
RATPEVLADT ARRIGSVFDD VARGVDVTPE PATLNALAAA NETYKQLAPK SSQAPIIGEV
VKRMTGAFRT GQAIPASTVN SWRSSLSKLT TSSDGATRSA AIEALGALDD ALASTLTSMG
RTDDVARLAT AREQWRNFLA IQKAATGAGE NAAAGILSPS ALRNAVVQQG RSSYAQGARG
ELGNLARAGE GILRPLPNSG TAQNIQAMGL PGLGWASAGA GLGSLAGGPT GGALGAAAGT
VMPGLLGMAR MSRPAQNWLA NQTVGRGTDI LPRNALSPVL AALLGLKED
|
|---|
| |