| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2046 |
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| Symbol | |
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| ID | 4580430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 2053922 |
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| End bp | 2056063 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639769375 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_915834 |
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| Protein GI | 119384778 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00183904 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGTCCT TTCCATCCCA TCCCCCTGCC CGCCTGCGAG CCAATCGCAA CCTGCGCGCA
GCCCTGCTGT CGCTGACGGC GCTTTGCGCG CCTGCGATGG CCCTGGCGCA AGAGGAAAAT
GCCGATGTCG TCGTCCTGGA CAACATCGTC ATCACCGCCG CAGGTTTCGA GCAGAACATC
AAGGAAGCGC CCGCCAGCAT CTCGGTCATC ACTGCCGAGG AACTGCAAAA GGGCAACTTC
ACCAGCCTGA CCGATGCGCT GAAAGAGGTT CAGGGCGTCG TCACGACCGG CACCGCCAAT
GAAGCGGACA TCTTCATCCG CGGCCTGCCG GGGCAATACA CCCTGATCCT TGTGGACGGA
AAGCGCCAGA GCACCCGCGA TTCGCGCACC AACGGCAATG CCGGCTATGA GCAGAGCTTC
ATCCCTCCGA TCGCCGCCAT CGACCGCATC GAGGTCGTGC GCGGGCCGAT GTCCTCGCTT
TACGGCTCGG ATGCCATGGG CGGGGTGATC AACATCATCA CCAAGCCGGT CGCCGACAGC
TGGACCGGCT CGGTTTCGGT CGAGACCGTG ATCCAGGACG AGGAAGGCTT CGAGAACAGC
CGGCAGACTT CGTTCTACGC CTCGGGTCCG CTGATCGCCA ATACGCTTGG TCTGCAGGTG
TGGGGTCGCA AGTTCGACCA GGACGCCTCG TCGATTTCCG GCGGGCCCGG CGGCTCGGAC
GACTACGACC TGGGCGCACG GCTGACCTGG CATGTGGATG ACCAGAACCA GGTGCTGCTG
GAGGCCGGCC GCACCCAGAT CACCGCCGAG GATTATGGCG ATCTGGGCTA TCGCGACCAT
GACCGCGACC ACTGGTCGCT GACCCACAAG GGCAGCTTTG CGGATCTGGA TACCGAGCTC
AGCTTCTCGC AGGAAACCGG CGAACGCACC TCCTACAGCC GCACCGCAGC CGGCGCCGAA
TTCGTCGAGA ACCTGCGCTC GCCCGAAGTG CGCAACTCGG TTCTGGACGG CAAGGCGACC
CGGACCCTGT CCTGGAACGG CGAGCACAGG CTGACCGTGG GCGGCCAGTT CCTGCGCACC
GAGATCTTCG ACCAGAACCC CGGCGCCGTG GCACCGGGCG AAGAGCCCCG CGACGAAAAG
TTCCAAGGCG ATGAATGGTC GCTTTATGTC GAGGACGAAT GGCGCCTGCG CGACGATTTC
GCCCTGACCC TGGGCGTGCG CTATACCGAT AACGAATTCT ACGGCGGCCA TGTCGCGCCC
CGCATCTACG GGGTCTGGAA CGCCACGCCG AACCTGACCG TGAAGGGCGG CATCTCGACC
GGCTACAAGA CGCCCGAACT ACGTTCGATC ATCCCGGGCT ACGCCTATAC CAGCGGCGGC
GCGGGCTGCG CCAGCAACAC GCCGCCCTCC TGCGCCGTGA TCCTGGGCAA TCCGGACCTG
AAGCCGGAAG AAACCCTGAA CTTCGAGCTG TCCACGGTCT ATGAGGCCGA CACCTTCACT
CTCAGCGCCA CGGCCTTCCA CACGAAGTTC GACAACAAGC TGCAGCAAAA AAGCGTTGGC
CGGGACACCG ACGGCGACGG GGTGATCGAC GAACACGAAT ACTGGACGGA CGGTCCCCAA
TATCTGGGCT CGGACGGCGA GCTGTATTAC CGCCGCATCA TCCAGAACTT CAACGTCGAC
AAAGCCGAGA TCAGCGGCCT GGAACTGGCC GGCGATTGGG ACATCACCTC GACGCTGTCT
GCGCGTGCGT CCTATACCTA TACGAAATCC GAGCAGAAGA CCGGCGAATT CGCGGGCTTC
CCGCTGGCGC GCACCCCCGA GCATATGGCC AGCCTGCGTT TCGACTGGAT GACCCCGGTC
GAAGGGCTGG ATACTTGGCT CTCGGCCAAT TACCATGGTT CGGAAATCGC CTCGGGCCTG
CGTATCGGCA GCAACGGTCG CGAAGTCGAG ATCAACGGCC AGACCGGGCG CAAATACTCG
CCCTACACGA CCGTCGATAT CGGCGCGAAC TATCGGATCA ACGAGATGGC GACCCTCAAC
GCCGCCGTCT ACAACGTCTT CAACGAAGAG GTTCTCGAGA CCGATTTCAA CACGGTCCAG
GAGGGTCGTC GCCTCTGGCT GGGCCTGACG GCGAGTTTCT AA
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| Protein sequence | MPSFPSHPPA RLRANRNLRA ALLSLTALCA PAMALAQEEN ADVVVLDNIV ITAAGFEQNI
KEAPASISVI TAEELQKGNF TSLTDALKEV QGVVTTGTAN EADIFIRGLP GQYTLILVDG
KRQSTRDSRT NGNAGYEQSF IPPIAAIDRI EVVRGPMSSL YGSDAMGGVI NIITKPVADS
WTGSVSVETV IQDEEGFENS RQTSFYASGP LIANTLGLQV WGRKFDQDAS SISGGPGGSD
DYDLGARLTW HVDDQNQVLL EAGRTQITAE DYGDLGYRDH DRDHWSLTHK GSFADLDTEL
SFSQETGERT SYSRTAAGAE FVENLRSPEV RNSVLDGKAT RTLSWNGEHR LTVGGQFLRT
EIFDQNPGAV APGEEPRDEK FQGDEWSLYV EDEWRLRDDF ALTLGVRYTD NEFYGGHVAP
RIYGVWNATP NLTVKGGIST GYKTPELRSI IPGYAYTSGG AGCASNTPPS CAVILGNPDL
KPEETLNFEL STVYEADTFT LSATAFHTKF DNKLQQKSVG RDTDGDGVID EHEYWTDGPQ
YLGSDGELYY RRIIQNFNVD KAEISGLELA GDWDITSTLS ARASYTYTKS EQKTGEFAGF
PLARTPEHMA SLRFDWMTPV EGLDTWLSAN YHGSEIASGL RIGSNGREVE INGQTGRKYS
PYTTVDIGAN YRINEMATLN AAVYNVFNEE VLETDFNTVQ EGRRLWLGLT ASF
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