Gene Pden_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2015 
Symbol 
ID4580399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2021929 
End bp2022711 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content71% 
IMG OID639769344 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_915803 
Protein GI119384747 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCT ATCACCCGCG CCGGGCCTCG ATTCTCGACT GGCCGCGTGC GGTGCTTTAC 
TACCTTTACG TGGCGCTGGT GACCCTGGTG CTGGGGCTTT GGGGCCTGCC GCAGGTGCTG
GTCCATCCCG AACGCGCGCA TCGCGTGGCC AGCCTGTGGC TGGGCCAGAT GCTGGGTGCG
GCGCGGGTCA TCCTGGGCGT GCGCATCGAA TATCGCGGCA CGCCGCCCGC CGGCGACTGC
ATCGTCGCCT CGAAGCATCA AAGCTTTCTC GACATTCTCG CGCTGGCCCA CGCCTGTCCG
CGCCGCGCCT TCGTCATGAA GCGCGAGGTG CTGCGGGTGC CGATCATGGG CTGGTTCGCG
CGCAAGGTCG GCTGCATCCC CATCGACCGC GCCCGGGGCA AGGAGGCGAT GAAGCAGATC
ATCGCCGGGG TCGAGGCCGC CCGCACCCGC CCCGGCGGGC TGGGCCAGTT GATCATCTAT
CCCGAGGGCA CCCGCACCCG GCCGGGGCAG AAACTGCCCT ACAAGCACGG CGCAGGCACG
ATCCAGCGCG CCACCGGCCT GCCGATCCAG CCGGTGGCGG TGAATTGCGG CCTGTTCTGG
CCCAAGCGCG GCATCCCGAT CCAGGGCGGC ACGGCGGTGA TCGAGTTCCT GCCGCCGATC
ACCGTCGGCC AGCGTTCCGG TGCGGTGATG GAACTTCTGG AGGCGCGGAT CGAGGCCGCA
AGCGACCGCC TGCTGGCCGA GGCCGGCGGC CTGCCCGGAA CCACGCCCGC GCCGGCGGCC
TGA
 
Protein sequence
MSAYHPRRAS ILDWPRAVLY YLYVALVTLV LGLWGLPQVL VHPERAHRVA SLWLGQMLGA 
ARVILGVRIE YRGTPPAGDC IVASKHQSFL DILALAHACP RRAFVMKREV LRVPIMGWFA
RKVGCIPIDR ARGKEAMKQI IAGVEAARTR PGGLGQLIIY PEGTRTRPGQ KLPYKHGAGT
IQRATGLPIQ PVAVNCGLFW PKRGIPIQGG TAVIEFLPPI TVGQRSGAVM ELLEARIEAA
SDRLLAEAGG LPGTTPAPAA