Gene Pden_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2013 
Symbol 
ID4578682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2020124 
End bp2020885 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content64% 
IMG OID639769342 
ProductABC-2 type transporter 
Protein accessionYP_915801 
Protein GI119384745 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGGC GTTCCGCCCG CGCCGTCTTC GGCCACGAGA TGGCGCGGTT CTTCCGCACG 
ATCTGGCAGT CGCTGGCCTC GCCGGTGCTG TCCACGGTGC TTTACTTCGT CGTCTTCGGC
GCCGCCATCG GCGGGCGCAT CCAGGCGGTC GAGGGCGTGC CCTACGGCGC CTTCATCGTG
CCGGGCCTGA TGATGCTGAC CGTGCTGCAG CAATCGGTGG CCAATGCCAG CTTCGGCATC
TATTTCCCGA AATTCGCCGG CACGATCTAT GAGATCCTCG TCGCCCCCAC CGGCTGGATC
GAGGTCACGC TGGGCTTTGT CGGCGCCGCC GCCGCCAAGG CGGTGATGAT CGCGCTGGTG
ATCCTGGTGA CAAGCTTCTG GTTCACCGGG GTCCATATCG CGCATCCGTT CTGGATGCTG
GCCTTTCTGT TCCTGACCGC CATCGCCTTT TCGCTTTTGG GCTTCATCAT CGGCCTTTGG
GCCAAGAATT TCGAGCAGTT GCAGATCGTG CCGATGATGG TGATCACGCC GCTGGTGTTC
CTGGGCGGCG CCTTCTATTC GGCCTCGATG CTGCCGCCCT TCTGGGAGGG CGTGGCCAAG
CTCAACCCGG TGCTTTACCT GATCTCGGGC TTTCGCTGGA GCTTTTTCGG CTTTGCCGAC
GTGCCGGTCG GGCTGTCGCT GGCGGCGGTG GCGCTGATGA TCCTGGTCTG CATGGGTGCG
ATCCGCTGGA TCTTCCTGAC CGGCTGGCGG CTGCGGGAGT GA
 
Protein sequence
MNWRSARAVF GHEMARFFRT IWQSLASPVL STVLYFVVFG AAIGGRIQAV EGVPYGAFIV 
PGLMMLTVLQ QSVANASFGI YFPKFAGTIY EILVAPTGWI EVTLGFVGAA AAKAVMIALV
ILVTSFWFTG VHIAHPFWML AFLFLTAIAF SLLGFIIGLW AKNFEQLQIV PMMVITPLVF
LGGAFYSASM LPPFWEGVAK LNPVLYLISG FRWSFFGFAD VPVGLSLAAV ALMILVCMGA
IRWIFLTGWR LRE