Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2008 |
Symbol | |
ID | 4578677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 2015124 |
End bp | 2016779 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639769337 |
Product | putative ABC transporter ATP-binding protein |
Protein accession | YP_915796 |
Protein GI | 119384740 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTCCT ACCAGTTCGT TTACCACATG GACGGGGTGT CCAAGACCTA TCCGGGCGGC AAGAAGACCT TCGAGAACAT CCGCCTGAAC TTCCTGCCCG GCGTCAAGAT CGGCGTCGTC GGCGTCAACG GCGCCGGCAA ATCGACGCTT CTGCGCATCA TGGCCGGCAT CGACAAGGAT TTCACCGGCG AGGCCTGGGC CGCCAAGGGC GCGACCGTCG GCTACCTGCC GCAGGAGCCG CAGCTTGACC CGGCGCTGAA CGTGCGCGGC AACGTCATGG AGGGCGTCAA GGCCAAGCAG GCCAAGCTGG ACCGTTATAA CGAACTCGCC ATGAACTATT CGGACGAAAC CGCCGAAGAA ATGGCGAAGC TTCAGGACGA GATCGATGCC GAGAACCTCT GGGATCTCGA CAGCCAGATC GACATCGCGA TGGAGGCGCT GCGCTGCCCG CCGGACGATG CCGACGTGGA AAGCCTCTCG GGCGGGGAAC GCCGCCGGGT GGCGCTGTGC AAGCTGCTGC TGGAACAGCC CGACATGCTG CTTCTGGACG AACCGACCAA CCACCTGGAC GCCGAGACCA TCGCCTGGCT GCAAAAGCAC CTGATCGAAT ATCCCGGCAC CATCCTGATC GTCACCCACG ACCGCTATTT CCTGGACGAC ATCACCGGCT GGATCCTGGA ACTCGACCGC GGCCGCGGCA TCCCTTACGA GGGCAACTAC TCGGCCTGGC TGGAGCAGAA GGCCAAGCGG CTGGAGCAGG AAGCGCGCGA GGACAAGGCC AAGCAAAAGA CGCTGGAACG CGAGCTGGAA TGGATCCGCG CCGGCGCCAA GGCGCGGCAG GCCAAGCAGA AGGCCCGGAT CAACGCCTAT AACGAACTGG CCAGCCAGTC CGAGCGTGAA AAGCTGTCGA ACGCCCAGAT CATCATCCCG AATGGCGAGC GGCTGGGCAA TAAGGTGATC GAGGTCGACG GGCTGAAGAA AGCCATGGGC GACAAGCTGT TGATCGAGAA CCTGTCCTTC AGCCTGCCGC CGGGCGGCAT CGTCGGCGTG ATCGGCCCGA ACGGCGCCGG CAAATCGACG CTGTTCAAGA TGCTGACCGG GCAGGAACAG CCCGACGCGG GCGAGATCAC CTATGGCGAC ACCGTGAAGC TCAGCTATGT CGACCAGTCC CGCGACGCGC TGGACCCGAA CAAGACCGTC TGGGAGGAAA TCTCGGGCGG GGCCGAACAG ATCGAACTGG GCGATGCGAC GATGAACAGC CGCGCCTATG CTTCCGCCTT CAACTTCAAG GGTGGCGACC AGCAGAAAAA GGTCGGCCTG CTTTCAGGCG GTGAGCGTAA CCGCGTGCAC ATGGCCAAAC TGTTGAAATC CGGCGGCAAC GTGCTGCTGC TCGACGAGCC GACCAACGAC CTGGATGTCG AGACCCTGCA GGCGCTGGAG GCGGCACTGG AGGATTTCGC CGGCTGCGCG GTCATCATCT CGCACGACCG CTTTTTCCTC GATCGACTTT GCACGCATAT CCTCGCCTTC GAGGGCGATG CGCATGTCGA GTGGTTCGAA GGCAACTTCG AGGATTACGA GGCCGACAAG GTCCGCCGCC TGGGCCCGGA TTCCATCGAG CCGAAGCGGG TGAAATACAA GAAGTTCACG CGCTGA
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Protein sequence | MASYQFVYHM DGVSKTYPGG KKTFENIRLN FLPGVKIGVV GVNGAGKSTL LRIMAGIDKD FTGEAWAAKG ATVGYLPQEP QLDPALNVRG NVMEGVKAKQ AKLDRYNELA MNYSDETAEE MAKLQDEIDA ENLWDLDSQI DIAMEALRCP PDDADVESLS GGERRRVALC KLLLEQPDML LLDEPTNHLD AETIAWLQKH LIEYPGTILI VTHDRYFLDD ITGWILELDR GRGIPYEGNY SAWLEQKAKR LEQEAREDKA KQKTLERELE WIRAGAKARQ AKQKARINAY NELASQSERE KLSNAQIIIP NGERLGNKVI EVDGLKKAMG DKLLIENLSF SLPPGGIVGV IGPNGAGKST LFKMLTGQEQ PDAGEITYGD TVKLSYVDQS RDALDPNKTV WEEISGGAEQ IELGDATMNS RAYASAFNFK GGDQQKKVGL LSGGERNRVH MAKLLKSGGN VLLLDEPTND LDVETLQALE AALEDFAGCA VIISHDRFFL DRLCTHILAF EGDAHVEWFE GNFEDYEADK VRRLGPDSIE PKRVKYKKFT R
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