| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_2005 |
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| Symbol | |
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| ID | 4578674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 2010891 |
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| End bp | 2012780 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639769334 |
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| Product | AMP-binding domain protein |
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| Protein accession | YP_915793 |
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| Protein GI | 119384737 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGGT TCGCAAGCGT CGCAGACCGC GATGCGGTCG AGGCGGAGAT GCCCTATGCG
GAGCGCCAGG TGCCGCATAC GGTCTATCAG GCCCTGACCG AGACCCGTGA CCGCCATCCC
CAGCGCCCCG CAATCAGCTT CCAGCTGTTC TCGGACCCCA AGGCTCCGGC CCGCACGCTG
ACCTGGACCG AGCTGCACGA GCGGGTGACC GAGACGGCGA ACCTGTTCCG CAGCCTGGGC
GTCGGGCCGG ACGATGTCGT CGCCTATCTG CTGCCCAACT GCATCGAGGC GCCGGTCGTG
CTGCTGGCGG GCGCGACGGC GGGGATCGTG AACCCGATCA ACCCGTTGCT GGAGCCCGAC
CACATCGCCG CCATTCTGCG CGAGACCGGC GCCAAGGTGC TGGTGACGCT GAAAAGCTTT
CCTAAATCCG AGGTCGCCCA GAAGGCGGCC GATGCGGTGG CCCAGGCGCC GAACGTGCAG
ACCGTGCTGG AGGTCGACCT GCGCGGCTAC CTGACCGGGG TGAAACGCCT GCTGGTGCCG
CTGATGCGAC CCAAGGTTAC CGCGCGGCAT CACGCCAAGG TCATGGATTT CGACGCCGCC
GCCAGCGCGC AGAAGCACAA CCGCCTGACC TTCGACGAAC CGGCCGAGGA TCGCGTCGCC
GCCTTCTTCC ACACCGGGGG CACCACCGGC ATGCCCAAGG TCGCCCAGCA CAAGCAGTCG
GGCATGATCT ATAACGGCTG GCTGGGCGGA ACGCTGCTGT TCACCGAAAC CGACGTGCTG
ATGTGCCCGC TGCCGATGTT TCACGTCTTC GCGGCCTATC CGGTTCTGAT GTCCTGCCTG
ATGTCGGGCG CGCAACTGGT CATGCCGACG CCCGCGGGAT ATCGCGGCGA AGGCGTGTTC
GACAACTTCT GGAAGCTGAT CGAGCGCTGG CAGGCGACCT TCCTGATCAC CGTGCCCACC
GCCATCGCCG CGCTGATGCA GCGCCCCGTG AATGCCGATG TCTCTTCGCT CAAGACCGCA
ATCTCGGGTT CTGCGCCCTT GCCGATCGAG CTTTACAACC GCTTCAAGGC GGCGACCGGG
GTCGAGATCG CCGAGGGCTA CGGGCTGACC GAGGCGACCT GCCTCGTGTC CTGCAACCCG
ATCAACGGGC TCAAGAAGGT CGGCTCGGTC GGCATCCCCC TGCCCCATAC CCATGTGCGC
ATCCTGCAAC GCCGGAACGG CGGTTTCCAC GAATGCGCCA CCGACGAGAT CGGCGAGATC
TGCGTGGCCA ATCCCGGCGT CTTCGAGGGC TCGACCTATA CCGAGGCCGA CAAGAACCAC
GATCTCTTCG CCGAAAGCCG CTTCCTGCGC ACCGGAGACC TCGGCCGGAT GGATGCCGAC
GGCTACCTGT GGATCACCGG GCGGGCCAAG GACCTGATCA TCCGCGGCGG CCACAACATC
GACCCCGCCG AGATCGAGGA TGCGCTGCTG TCCCATCCCA AGGTCGCCGC GGTGGCCGCC
ATCGGCCAAC CCGATTCCTT TGCCGGCGAG CTGCCCTGCG CCTATGTCGA GCTGATCGCG
GGCGCCGAGG TCGGGCTGGA CGAGTTGATG GAGCATGCCC GCACCCATAT CCACGAACGC
GCCGCAGTGC CGAAGCATGT CGAGATTCTG CCCGAACTGC CCAAGACCAC CGTCGGCAAG
ATCTTCAAGC CCGACCTGCG CAAGCTGGCG ATCCGCCGCG TCTATGACTC CGCCCTGGCC
GAGGCCGGGC TGGCGGCCGA GGTGGGCGAG GTGGTCGATG ACCGCAAGCG CGGCCTGGTC
GCCCACATCC GTCCCAAGGG CCAGGTCGAC CGCAGCGCCG TCGAACAGCT GCTGGGCCAA
TACGCCTTGC CGTGGGAGTG GGTCGGCTAG
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| Protein sequence | MARFASVADR DAVEAEMPYA ERQVPHTVYQ ALTETRDRHP QRPAISFQLF SDPKAPARTL
TWTELHERVT ETANLFRSLG VGPDDVVAYL LPNCIEAPVV LLAGATAGIV NPINPLLEPD
HIAAILRETG AKVLVTLKSF PKSEVAQKAA DAVAQAPNVQ TVLEVDLRGY LTGVKRLLVP
LMRPKVTARH HAKVMDFDAA ASAQKHNRLT FDEPAEDRVA AFFHTGGTTG MPKVAQHKQS
GMIYNGWLGG TLLFTETDVL MCPLPMFHVF AAYPVLMSCL MSGAQLVMPT PAGYRGEGVF
DNFWKLIERW QATFLITVPT AIAALMQRPV NADVSSLKTA ISGSAPLPIE LYNRFKAATG
VEIAEGYGLT EATCLVSCNP INGLKKVGSV GIPLPHTHVR ILQRRNGGFH ECATDEIGEI
CVANPGVFEG STYTEADKNH DLFAESRFLR TGDLGRMDAD GYLWITGRAK DLIIRGGHNI
DPAEIEDALL SHPKVAAVAA IGQPDSFAGE LPCAYVELIA GAEVGLDELM EHARTHIHER
AAVPKHVEIL PELPKTTVGK IFKPDLRKLA IRRVYDSALA EAGLAAEVGE VVDDRKRGLV
AHIRPKGQVD RSAVEQLLGQ YALPWEWVG
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