Gene Pden_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1999 
SymbolgpsA 
ID4578668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp2005999 
End bp2006943 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content72% 
IMG OID639769328 
ProductNAD(P)H-dependent glycerol-3-phosphate dehydrogenase 
Protein accessionYP_915787 
Protein GI119384731 
COG category[C] Energy production and conversion 
COG ID[COG0240] Glycerol-3-phosphate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGG CGATCATCGG CGCGGGCGCC TTCGGCACGG CGCTGGCGGT TTCTCTGGCG 
ACCAAGGGGC CGGTGACGCT TTGGGGCCGC GACACGGAAT GGGCCGACAC GGGCGAGAAC
CCGCGCCTGC CCGGCGTGCC CCTGCCGCCG GCGCTGCGCG TCACCGACCG GCTGGACGAG
ATCACGGCCG AAACCGTGCT GCTGGCGCTG CCCGCGCAGG TGCTGGGCGG CTTTCTGGCC
GAGCACGGCG CGCAGTTCGA CCGCCGCAAC CTGGTCAGCT GCGCCAAGGG CATCGACCTG
GCCACGCTGA CCGGGCCTTC GGCACTGATC GCCGCCGCCT GTCCGCAGGC GACGGTAGCG
GTGCTGACCG GGCCCAGCTT TGCCGCAGAC ATTGCCCGCG GCCTGCCCAC CGCGCTGACG
CTGGCCTGCG CCGATGCAGG TGCGGCCGAG GCGCTGCAAC GCCAGCTTTC CACCGCCACG
CTGCGGCTTT ACCGCACCAC CGACGTGACC GGCGCCGAAC TGGGCGGGGC GCTGAAGAAC
ATCATCGCCA TCGCCGCCGG AGCCGCCATC GGCGCGGGCT ATGGCGACAG CGCGCGCGCC
AGCGTCGTCA CGCGCGGCTT TGCCGAGATG CTGCGGCTGG CCACCGCGCT CGGCGCCCGG
CCCGAGACGC TGCCGGGCCT GTCGGGCCTT GGCGATCTGG TGCTGACCTG CACCTCGGAA
CAATCGCGCA ATTTCCGCTA TGGACTGGCG TTGGGATCGC GCCGGCCCTT CGCCGCCGGC
ACCACGGTCG AGGGTGCCTC GACCGCCCGC GCCGTCACCC AGCTTGCCGA AAGGCTGGGG
ATCGAGATGC CGATCTCGAA TCTGGTCGCG GGTCTTGCCG AGGGCCGCAT CGCCATGGAA
CATGCGCTGG ACTTTCTGCT GAACCGCCCG CTCAAGGAGG AATGA
 
Protein sequence
MSVAIIGAGA FGTALAVSLA TKGPVTLWGR DTEWADTGEN PRLPGVPLPP ALRVTDRLDE 
ITAETVLLAL PAQVLGGFLA EHGAQFDRRN LVSCAKGIDL ATLTGPSALI AAACPQATVA
VLTGPSFAAD IARGLPTALT LACADAGAAE ALQRQLSTAT LRLYRTTDVT GAELGGALKN
IIAIAAGAAI GAGYGDSARA SVVTRGFAEM LRLATALGAR PETLPGLSGL GDLVLTCTSE
QSRNFRYGLA LGSRRPFAAG TTVEGASTAR AVTQLAERLG IEMPISNLVA GLAEGRIAME
HALDFLLNRP LKEE