Gene Pden_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1988 
Symbol 
ID4581146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1991660 
End bp1992928 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content71% 
IMG OID639769316 
ProductFolC bifunctional protein 
Protein accessionYP_915776 
Protein GI119384720 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0285] Folylpolyglutamate synthase 
TIGRFAM ID[TIGR01499] folylpolyglutamate synthase/dihydrofolate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.362806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTT CCGACGCCAT TCTCGCGCGG CTCATGCAGC TGCATCCCAA GGTCATCGAC 
CTGTCGCTGG ACCGGATGCA TCGCATCCTT GCCGCCTTGG GCGACCCTCA GCGTCGCATC
CCGCCCGTGA TCCATATCGC CGGGACCAAC GGCAAGGGCT CGACCCAGGC GATGATCCGG
GCCGGGCTCG AATCGGCGGG CAAGCGGGTC CATGCCTATA CCTCGCCGCA TCTGGCGCAG
TTCCATGAAC GCATCCGGCT GGCCGGCGAG CTGATCGCCG AGCCCGACCT GGCTGCCGCG
CTGGAGGAAT GCGAGGCCGC GAACGGCGGC GCGCCGATCA CCTTCTTCGA GATCACCACG
GCGGCGGCCT TCCTCGCCTT TTCGCGCATA CCGGCGGATT ACACGCTGCT GGAGGTGGGC
CTTGGCGGCA GGCTGGACGC GACCAATGTG ATCGACGATC CGGCGCTGAC CGTCATCACC
CCGATCAGCA TCGACCACAC GCAATATCTG GGCGAGACGC TGGCCGAGAT CGCCGGCGAA
AAGGCCGGGA TCCTCAAGCG CCGCGTGCCC TGCATCGTCG GGCCGCAAGA GCCCGTCGCC
CGCGAGGCGA TCGAGCAAAA GGCCGAGCGC CTGTTCGCGC CGCTGCGCAT CGCCCGGCAG
GACTGGGACA GCCGGCGCGA GGGCGACAGC CTGATCTATC AGGACGAGCA CGGGCTGATG
GACCTGCCCC TGCCGGTGCT GCCCGGTCCG CATCAGATCG TGAACGCCGG CACCGCCATC
GCCGCGCTGC GCGAGTTGGG CTTCGGCCGC ATCGAGGCTC GCGCCGCGGT GATCGAGGCG
GAGTGGCCCG CCCGCATGCA GCGCCTGACC CGCGGCCCGC TGGTCGAGGC GGCGGGGGCT
TGCGAGCTGT GGCTGGACGG CGGCCACAAC CCGGCGGGCG GCGAGGCGGT GGCGGCGACG
CTGTCGGCCA TGGCAAGGAA ACCGACGCAT CTGGTCTGCG GCATGCTGAA CACCAAGGAT
GTCGCGGGCT ACATGCGGCC ACTGGCCGGC GTCGCGCAAA GCCTGACCGC CGTGGCGATC
CCGGGCGAGC CGAACACCCT GCCGGCCGAG GACACCGCGG CCGCCGCTGC CTCGGTCGGG
CTTGCGGCCG GAACCGCCCC GGACGCGCTG GCCGCCGTGC AGCGCCTCGC CGTCGACCAG
CCCGGTGCGC GCATCCTGAT CTGTGGCTCG CTCTATCTCG CCGGGCAGGT GCTGCGCCAG
AACGGCTAG
 
Protein sequence
MTSSDAILAR LMQLHPKVID LSLDRMHRIL AALGDPQRRI PPVIHIAGTN GKGSTQAMIR 
AGLESAGKRV HAYTSPHLAQ FHERIRLAGE LIAEPDLAAA LEECEAANGG APITFFEITT
AAAFLAFSRI PADYTLLEVG LGGRLDATNV IDDPALTVIT PISIDHTQYL GETLAEIAGE
KAGILKRRVP CIVGPQEPVA REAIEQKAER LFAPLRIARQ DWDSRREGDS LIYQDEHGLM
DLPLPVLPGP HQIVNAGTAI AALRELGFGR IEARAAVIEA EWPARMQRLT RGPLVEAAGA
CELWLDGGHN PAGGEAVAAT LSAMARKPTH LVCGMLNTKD VAGYMRPLAG VAQSLTAVAI
PGEPNTLPAE DTAAAAASVG LAAGTAPDAL AAVQRLAVDQ PGARILICGS LYLAGQVLRQ
NG