| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1984 |
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| Symbol | |
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| ID | 4581142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1987039 |
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| End bp | 1988772 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639769312 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_915772 |
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| Protein GI | 119384716 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.9458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA GCCGCTTCGA CAAGTCGTCC CTGCCCAGCC GCCATGTGAC CGAAGGGCCG
GCCCGCGCGC CGCATCGCAG CTATTTCTAT GCCATGGGCA TATCGGAGGA AGAAATCCAT
TCCCCCTGGG TGGGCGTCGC CACCTGCTGG AACGAGGCCG CGCCCTGCAA CATCGCGCTG
GCCCGACAGG CGCAATCGGT CAAGCAGGGC GTCAAGAAGG GTGGCGGCTG CCCGCGCGAA
TTCACCACCA TCACCGTCAC CGACGGTATT GCCATGGGAC ATGAGGGGAT GCGCTCCAGC
CTCGCCTCGC GCGATGCCAT CGCCGATACG GTCGAGCTGA CCATGCGCGG GCATTGCTAC
GACGCGCTGG TCGGGCTGGC GGGCTGCGAC AAGTCGCTGC CGGGCATGAT GATGGCCATG
GTGCGGCTGA ACGTGCCCAG CGTCTTCATC TATGGCGGCT CGATCCTGCC GGGCAAGCTC
AACGGCCGCG ACGTGGTGGT GCAGGACGTG TTCGAGGCGG TGGGCCAGCA CGCGGCCGGC
AACATGTCCG ATGCCGAGCT GGAGATCCTG GAGCGCGTGG CCTGCCCCTC GGCCGGGGCC
TGCGGCGGGC AATATACCGC GAACACCATG GCTTGCGTGT CGGAAGCCAT CGGGCTGGCG
CTGATGAACA GCTCGGGCGC GCCGGCGCCT TACGAATCGC GCGACCAGTA TGGGCTGGCC
TCGGGCGAGG CGGTGATGGC GCTGATCGAA AGGAACATCC GTGCCCGCGA CGTGGTGACG
CGCAAATCGC TGGAAAACGC GGCGCGGGTG GTGGCCTGCA CCGGCGGCTC GACCAATGCC
GGGTTGCACC TGCCCGCCAT CGCGCATGAG GCGGGGATCG AATTCGACCT GTTCGACGTC
TGCGAGATCT TCCGCGACAC GCCCTATTTC GTGAACCTGC GCCCGGGCGG CGATTACGTC
GCCAAGGACT TGTTCGAGGC CGGGGGCGTC CCGGTCGTCA TGCGCGAATT GCGCCGCGCC
GGGCTGATCC ACGAGGATTG CCTGACCGCC TCGGGCCGCA GCATGGGCGA GGAGCTGGAC
CTGGTCAAGC GCGAGGCCGA CGGCAAGGTG ATCCATCCGG TGACGGCGCC GCTGTCCAGG
ACCGGCGGCG TGGTCGGGCT GCGCGGCAAC CTGGCGCCCG ACGGCGCCAT CGTGAAGGTC
GCGGGAATGG CGCCCGAGCA CCAGGTCTTT ACCGGCCCCG CCCGGGTCTT CGAATGCGAG
GAAGAGGCGT TCGAGGCCGT CGCCCGCCGC GATTACAGCG AGGGCTGCGT GATCGTCATC
CGAAACGAGG GGCCGGCCGG CGGCCCCGGC ATGCGCGAGA TGCTGGCGAC CACGGCGGCG
CTGTCGGGGC AGGGCATGGG CAAGAAGGTG GCGCTGATCA CCGACGGGCG GTTCTCGGGC
GCGACGCGCG GCTTCTGCGT CGGCCATGTC GGTCCCGAGG CGGCGCATGG CGGCCCCATC
GCCCTGCTGC GCGACGGCGA CATGATCACC ATCGACGCGA TCAGGGGCGA GATCTCGGTG
GCGCTGCCGG ACGAGGAACT GACGCGGCGC CGCGCCGCAT GGGCGGGACC GCGCAAGACC
GACTATGCCT CGGGCGCGCT GTGGAAATAC GCCCAGTTGG TCGGCAAGGC GCGCTATGGC
GCGGTCACCC ATCCGGGCGC GGCGGCCGAA ACCCATGTCT ATATGGATCA GTGA
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| Protein sequence | MKNSRFDKSS LPSRHVTEGP ARAPHRSYFY AMGISEEEIH SPWVGVATCW NEAAPCNIAL
ARQAQSVKQG VKKGGGCPRE FTTITVTDGI AMGHEGMRSS LASRDAIADT VELTMRGHCY
DALVGLAGCD KSLPGMMMAM VRLNVPSVFI YGGSILPGKL NGRDVVVQDV FEAVGQHAAG
NMSDAELEIL ERVACPSAGA CGGQYTANTM ACVSEAIGLA LMNSSGAPAP YESRDQYGLA
SGEAVMALIE RNIRARDVVT RKSLENAARV VACTGGSTNA GLHLPAIAHE AGIEFDLFDV
CEIFRDTPYF VNLRPGGDYV AKDLFEAGGV PVVMRELRRA GLIHEDCLTA SGRSMGEELD
LVKREADGKV IHPVTAPLSR TGGVVGLRGN LAPDGAIVKV AGMAPEHQVF TGPARVFECE
EEAFEAVARR DYSEGCVIVI RNEGPAGGPG MREMLATTAA LSGQGMGKKV ALITDGRFSG
ATRGFCVGHV GPEAAHGGPI ALLRDGDMIT IDAIRGEISV ALPDEELTRR RAAWAGPRKT
DYASGALWKY AQLVGKARYG AVTHPGAAAE THVYMDQ
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