Gene Pden_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1979 
Symbol 
ID4581137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1983453 
End bp1984283 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content67% 
IMG OID639769307 
Productmethionine aminopeptidase, type I 
Protein accessionYP_915767 
Protein GI119384711 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.55147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGGCAG ACCAGCACGA GGACGCCATG AACGACGCAC GCCAGACCCG CGAGGGGATC 
CGCATCCACG ACCCGCAGGA CTTCCAGGGC ATGCGGGCGG CCGGTCTGAT CGCGGCGCAG
ATCCTGGACG AGGTAGGTCC GCTGGTGCAG CCCGGCGCCA CCACGGGCGG CCTGGACGAT
TTCATCCGCG GCCGGGTCGA GGAACTGGGC GTCACCAGCG CCACCATCGG CTATCGCGGC
TATCAGCATG CCAGCTGCAT CAGCGTGAAC CATGTCGTCT GCCACGGCAT TCCCGGAGAC
AAGATCCTGA CCGACGGCGA TATCCTGAAC ATCGACGTGA CGGTGATCGC GGACGGTTGG
TTCGGCGACA GCTCGCGCAT GTATGTGGCG GGCAAGCCCA GCGTCAAGGC GCGGCGGCTG
ATCCAGGTCA CCCATGACGC GCTGATGCGC GGCATCGAGG CCGTCCGTCC CGGCGCCACC
TTCGGCGACA TCGGCTGGGC CATCCAGTCC TATGTGGAAT CGAACCGCAT GTCGGTGGTG
CGCGACTTCT GCGGCCACGG CCTCGGCCGC ACCTTCCACG CGCCGCCGAA CGTCCTGCAT
TTCGGCCGCC CCGGCAAGGG CCCGGTGCTG GAGGAGGGCA TGTTCTTCAC CATCGAGCCC
ATGGTGAACC TTGGCCGCCC CGAGACCAAG ATCCTTGCCG ACGACTGGAC GGCGGTGACG
CGCGACAAGT CGCTCTCGGC CCAGTTCGAG CATTCGATCG GCGTGACGGC GGATGGCTGC
GAGATCTTCA CGCCCTCGCC CAAGGGCCTG TTCTTCCCCG ATTTGGGCTG A
 
Protein sequence
MGADQHEDAM NDARQTREGI RIHDPQDFQG MRAAGLIAAQ ILDEVGPLVQ PGATTGGLDD 
FIRGRVEELG VTSATIGYRG YQHASCISVN HVVCHGIPGD KILTDGDILN IDVTVIADGW
FGDSSRMYVA GKPSVKARRL IQVTHDALMR GIEAVRPGAT FGDIGWAIQS YVESNRMSVV
RDFCGHGLGR TFHAPPNVLH FGRPGKGPVL EEGMFFTIEP MVNLGRPETK ILADDWTAVT
RDKSLSAQFE HSIGVTADGC EIFTPSPKGL FFPDLG