Gene Pden_1969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1969 
Symbol 
ID4578735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1969844 
End bp1970968 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content53% 
IMG OID639769290 
Producthypothetical protein 
Protein accessionYP_915757 
Protein GI119384701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0526439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.203298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGTA ATTTTGACGA AAGACTGGCG CGTCTGCGCA CTCGTCGGAT GGACGATCAG 
AATACGGTTC TGGCTTCGCG GGGCTTCGGG GAATCCTATG AAAAACGCTC TGCCAACAAG
GCGACGAAAT ATGTTCTCGG TGCCATGCAG GAGGTCGATC CACGGTCTAC ACAGATTTCG
CATGAGGAAG CCCAGAAGGT TGAGAGGAAC CTTAAGGAAG GACTGGAAGC TGAAGGGCTT
TTTCCGAACT TTCGATTACA GGGATCGGTT CCGCTCAATG TCCACATTCG CGGTGTTAGC
GATGTTGATC TGCTCGTCAT TGAGGGTTGC TACCTGCGCT ACGAAAGCTG CGAAGGGAGC
CGCAAGAGCT ACCTTCCCTA TACTGGTCGG GGCCAATTGG TGGACGATGT TCTGTTCCTC
CGATCGAAAT CCGAAGAGAT TTTAGAGCGA CGCTTCTGGG GAGCCACCGT CGATAAATCC
CCCGCCAAAT CCATTCAACT TTCCGACGGA GCATTCCGGC GAAAGGTGGA TGTTGTGCCT
TCCAACTGGC TGGATACTGT GAATTACCAG AGAACGCTGG TAGATGCGCA CAGGGGCATA
CAGATCGTCA ACAAATATAC TCGCGAGCAT ATCAGCAACT ATCCATTCGT CTACATTGCT
GAGATTACCT CTAAAGCTCG CCAAACTAAT GAGGGAGCCC GCATGGGCAT CCGTCTCGCG
AAGAACGTTA AGAACGATGC AGAGGCCGAG ATTGCGCTTA GCAGCTACGA TATCGGTAGT
CTAATCTACC ATTGCCCCAA TCATTACGTC ACACATCTGG TTGCACGAGA TTTGATGATA
CTGTCGGGCG TCGAGCGCTG GTTCGATGAA TTATCACGCG ACCGCGTAAG AGCCACCTCC
CTCATGACCC CGGACGGAAC AAGGCGAATC TTGGACGGAA CCGCGAAGTG GGAGGGTCTG
TTGAAGCTGT CCAGTGAATT GACCGATCTG GCCCAAGCCG TCGAGCGGGA ACTCGCTAGT
CCCTACGATT ACGCGCCTCC GGATCGTGAC ACACTGCGTA AGCGTCTCAA TGATAATGCC
ATCCCGCTGG CACCTGAGTT AATTGTTGGT GGAGTAAGGT TCTAA
 
Protein sequence
MPRNFDERLA RLRTRRMDDQ NTVLASRGFG ESYEKRSANK ATKYVLGAMQ EVDPRSTQIS 
HEEAQKVERN LKEGLEAEGL FPNFRLQGSV PLNVHIRGVS DVDLLVIEGC YLRYESCEGS
RKSYLPYTGR GQLVDDVLFL RSKSEEILER RFWGATVDKS PAKSIQLSDG AFRRKVDVVP
SNWLDTVNYQ RTLVDAHRGI QIVNKYTREH ISNYPFVYIA EITSKARQTN EGARMGIRLA
KNVKNDAEAE IALSSYDIGS LIYHCPNHYV THLVARDLMI LSGVERWFDE LSRDRVRATS
LMTPDGTRRI LDGTAKWEGL LKLSSELTDL AQAVERELAS PYDYAPPDRD TLRKRLNDNA
IPLAPELIVG GVRF