Gene Pden_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1964 
Symbol 
ID4578730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1966566 
End bp1967483 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content60% 
IMG OID639769285 
Producthypothetical protein 
Protein accessionYP_915752 
Protein GI119384696 
COG category[S] Function unknown 
COG ID[COG2253] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0455905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGTG AGGACTATGA AGCTCAGGTC GCGTTGCTCG TGCGCGTGCT CCCGCATGTC 
GCGAAGGAAA GGGCATTCGC GCTCAAGGGC GGCACGGCGA TCAACCTGTT CTACCGCGAT
CTGCCCCGCC TGTCGGTCGA TATCGATCTG ACCTACCTGC CGATCAAGGA TCGCCGTGAA
AGCCTCGCTG AGATCAACGA GGCAATGGAT CGCATCGCCG CCGCCGTCGA AGGCAGCATA
GCCGGCGTGA AGACGCAACG CATCCAAGGC GGGGGAGGCG GCGCCACCCG TGTTCTCGTT
CGACTGGGTG GTGCCGAGAT CAAGATCGAG ACCTCGCCGG TCATGCGTGG CGCCGTCCAC
GATCCCGAGA TGCGCCCGGT GTCAGATGCG GTTGAGGACG AATTCGGCTA TGCAGAGATG
CAGGTGGTTT CCTTCGAGGA TCTGTTCGGA GGCAAGTTGC ATGCCGCAGT GGACCGCCAG
CATCCGCGTG ACCTCTATGA CATCAAGCTG CTGTACGAGA ATGAAGGTCT GACAGAGGAT
CTGTTCCGGA CCTTCCTGAT CTATATCGCC TGCTCATCGC GTCCCGCGCA TGAACTTCTG
AACCCGAACT TTATCGACCT CGACCAGCCT TATACGAAGG AGTTTGAAGG CATGACGAAG
GTCCATGTCA GTCTTGACGA CCTGCTCGAA ACCCGCAAAC GGCTGGTCGC GGACATCCGG
TCTCGTCTTG ATGAAAAGGC CAGGACGTTT CTCCTGAGCC TGCATGATGG CACGCCCGAC
TTCGATGCCA TCGAACGGCC GCGGGCGGCT GACCTGCCTG CAGTTCGTTG GAAGCTGATC
AATCTGGAGA AGCTGAAGAG CGACAACCCG GCCAAGCATG CGGAGCACCG ATCTGTGCTG
GAAGCGCTGT TCCGCTAG
 
Protein sequence
MAREDYEAQV ALLVRVLPHV AKERAFALKG GTAINLFYRD LPRLSVDIDL TYLPIKDRRE 
SLAEINEAMD RIAAAVEGSI AGVKTQRIQG GGGGATRVLV RLGGAEIKIE TSPVMRGAVH
DPEMRPVSDA VEDEFGYAEM QVVSFEDLFG GKLHAAVDRQ HPRDLYDIKL LYENEGLTED
LFRTFLIYIA CSSRPAHELL NPNFIDLDQP YTKEFEGMTK VHVSLDDLLE TRKRLVADIR
SRLDEKARTF LLSLHDGTPD FDAIERPRAA DLPAVRWKLI NLEKLKSDNP AKHAEHRSVL
EALFR